| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1699 |
|---|
| Symbol | |
|---|
| ID | 5800170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 1752859 |
|---|
| End bp | 1753599 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641339639 |
|---|
| Product | oxidoreductase, short chain dehydrogenase/reductase family protein |
|---|
| Protein accession | YP_001606194 |
|---|
| Protein GI | 162419330 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0105879 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGA AAGGGAAGAA AGCCTTGGTC ACTGCTGCCG GGCAGGGGAT CGGCTTCAAT
ACAGCCACGT TGTTTGCCCG CAAAGGCGCA GAAGTGATCG CTAGCGATAT CAATATCGCT
GCGTTGTCCA ACATACCGGG TATAACGGCA GTGTCATTGG ATGTGACTGA CACGTTGGCT
ATCAATGATG TGGCGCAGGC AATCGGCCCG ATAGACGTGC TGTTTAACTG TGCGGGCGTG
GTACACAGCG GCGATATTCT CACCTGTAGC GAGCAGGAGT GGCAGTTCGC GCTAGACCTC
AACGTCACCG CTATGTTCCA TATGATCCGT GCCTTTCTAC CTGGGATGAT CGCGTGCCAA
CAGGGTTCTA TCATCAATAT GTCTTCGGTG GCTTCAAGTA TTAAAGGGGT ACCGAATCGT
TTTGCCTATA GCACTTCTAA AGCCGCGGTC ATTGGCCTGA CGCGTTCTGT TGCTGCGGAT
TATGTCACGC AGGGCATCCG CTGTAATGCC ATCTGCCCCG GAACAGTTGA ATCTCCTTCT
CTGCGTCAGC GGATTGCCGT ACAGGCACAC GCCGAAGGGC GCAGCGAAGC TGATGTCTTT
CAGGCATTCG CTGCACGTCA ACCGATTGGC CGTATCGGCA AAGCAGAAGA GATAGCGCAA
TTGGCACTGT ATCTGGCCTC GGATGCCAGC GCTTACACCA CCGGCACGAT ACATATTATC
GACGGAGGCT GGAGCAATTA A
|
|---|
| Protein sequence | MNLKGKKALV TAAGQGIGFN TATLFARKGA EVIASDINIA ALSNIPGITA VSLDVTDTLA
INDVAQAIGP IDVLFNCAGV VHSGDILTCS EQEWQFALDL NVTAMFHMIR AFLPGMIACQ
QGSIINMSSV ASSIKGVPNR FAYSTSKAAV IGLTRSVAAD YVTQGIRCNA ICPGTVESPS
LRQRIAVQAH AEGRSEADVF QAFAARQPIG RIGKAEEIAQ LALYLASDAS AYTTGTIHII
DGGWSN
|
|---|
| |