| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3393 |
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| Symbol | |
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| ID | 4075567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 413357 |
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| End bp | 414115 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004902 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_611627 |
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| Protein GI | 99078369 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.407663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACACGA TGACACAGAA CACAGGCCGG CTGGCCGAAA AAACAGCTTT GATTACTGCT
GCGGGGCAGG GGATCGGTCG CGCCAGCGCG GAACTCTTTG CGGCTGAGGG CGCCAAGGTG
ATCGCCTGCG ACATCAATGC AGAGTCATTG GCAGAACTCG CGGAGGTCGA TGGGATCACG
GCCCTTGCGC TTGATGTCAC GGATGCATCC GCAGTTGCGC GCGCAATCCA AGATGCAGGG
CCATTGAATG TGTTGTTCAA CTGCGCGGGA TATGTCGCAA GTGGCAGCAT TTTGGACTGC
GATGAGAACG ACTGGGACTT CAGTTTCGAC CTCAACGTCA AAGCCATGTA TCGCCTCACG
AAACTGGTTT TGCCCGGCAT GCTGGAAAAC GGCGGTGGCT CTATCATCAA CATGTCGTCG
GTGGCCTCCT CCCTGAAAGG GGTGCCAAAT CGCTTTGCCT ATTGCGCGTC AAAGGCGGCG
GTGATCGGCA TGACCAAATC CATTGCCGCA GATTTTGTGA CCCAAGGTAT CCGTTGCAAC
GCGATTTGCC CCGGCACGGT GGACAGTCCC AGCCTGCATG ATCGGCTGCG CGCTACGGGC
GATTATGAGC AGGCCCGCAA GGATTTCATC GCACGTCAGC CCATGGGGCG CATTGGCAAG
GCTGAAGAGA TTGCGGCGCT CGCGCTCTAT CTCGCCAGCG ATGAGAGCGG CTTTACCACT
GGACAGACCC ACGCCATCGA CGGCGGCTGG GCGATTTGA
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| Protein sequence | MNTMTQNTGR LAEKTALITA AGQGIGRASA ELFAAEGAKV IACDINAESL AELAEVDGIT
ALALDVTDAS AVARAIQDAG PLNVLFNCAG YVASGSILDC DENDWDFSFD LNVKAMYRLT
KLVLPGMLEN GGGSIINMSS VASSLKGVPN RFAYCASKAA VIGMTKSIAA DFVTQGIRCN
AICPGTVDSP SLHDRLRATG DYEQARKDFI ARQPMGRIGK AEEIAALALY LASDESGFTT
GQTHAIDGGW AI
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