| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1651 |
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| Symbol | |
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| ID | 5109625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1813264 |
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| End bp | 1814028 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502879 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001187147 |
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| Protein GI | 146306682 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.44826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA TCAAGAACAT CATCACCCAG GAAGTCGAGG GCAAGGTTGC CCTGGTTACC
GGCGCCGCCA GCGGTATCGG CAAGGCCACC GCGCTGTTGC TGCGTGGGCG CGGGGCCAAG
GTCATCGCGG AGGACATCGA TCCCGCCGTG GAGGAACTGG CCCAGCCGGG GCTGGTGCCC
CTGGTGGCCG ACATCACCGC GGACGGAGCC GCCGAGCGCG CGGTGGCTTT GGCAGTCGAA
CAGTTCGGTC GGCTCGACAT CCTGGTGAAC AACGCGGGCA TCATCATCAA CAAGGCGGTG
GTGGACATGA CCCGGCATGA TTGGGAGCGC ATCCAGGCCG TCAACGCCAC CGCGGCGTTT
CTGCATTGCC GCGAAGCGAT GAAGGCGATG ATGCCGAACA AGTCCGGCGC CATCGTCAAT
ATCGCTTCCT ACGCGTCGTA CTTCGCCTTT CCCACCATCG CTGCCTACGC CGCTTCCAAG
GGAGCGCTGG CCCAGCTCAC CCGCGCGCTG GCGCTCGAGG CCATCGAGCA TGGCATTCGG
GTAAACGCCG TCGGTTCGGG AGATGTGGTG ACCAACATCC TCAACGATGT GGTGGAGGAC
GGCCCGGCCT TCCTGGCCCA GCACGGCGAG GCCGCGCCGA TCGGCCGTGC GGCTCAGCCG
CAGGAGATCG CTGAGGTAGT GGCATTCCTC GCCTCCGAGC GGGCCAGCTT TATGGTTGGC
GCGGTGCTCA TGGCCGATGG CGGCATGACG GTGACGGCCG GCTGA
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| Protein sequence | MADIKNIITQ EVEGKVALVT GAASGIGKAT ALLLRGRGAK VIAEDIDPAV EELAQPGLVP
LVADITADGA AERAVALAVE QFGRLDILVN NAGIIINKAV VDMTRHDWER IQAVNATAAF
LHCREAMKAM MPNKSGAIVN IASYASYFAF PTIAAYAASK GALAQLTRAL ALEAIEHGIR
VNAVGSGDVV TNILNDVVED GPAFLAQHGE AAPIGRAAQP QEIAEVVAFL ASERASFMVG
AVLMADGGMT VTAG
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