Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_4004 |
Symbol | |
ID | 3711782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | + |
Start bp | 42730 |
End bp | 43509 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640069333 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_345200 |
Protein GI | 77404626 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.132038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGGT TCGAGGGGCG GGTCGCGCTC GTCACCGGCG GGGGCCGCGG CATCGGGCAG GCCATCGCCC GGCGCCTCGC CTCGGACGGG GCGCGGGTCT TCACGGCGCA GCGCGGCGCG GACGCCGGGT TCGAGGCCAT CGCGGCCGAC TTCGCCGATG CGGACGCGCC CGCCCGCGCT GTGGCCGAGG CGGTGGATCG GGCGGGGCGG CTCGACGTCT TGGTGAACAA TGCGGGCGTG ATGCAGGAGG CGCGGGTCGA GGAGATGGCG CTGGCCGACT GGGAGCGCAC GATCCGCGTG AACCTGACCG CGCCGTTCCT TGCGATCCGG GCGGCGCTGC CGCATCTGCG GGCCGTGCGG GGCGCCATCG TCAATGTGGG CTCCATCGAG GGGCTGGGGG CGAACCCGCG CCATGCCGCC TATTGCGCCT CGAAGGCGGG GCTGCACGGG CTGACGCGGG CGGTGGCCGT CGATCATGGC GCGGAGGGCA TCCGCTGCAA CGCGGTCGCG CCGGGCTGGA TCGAGACGGA GCTGAACGAG GCCTTCGTGG AAGCGATGCC CGACCCCGAG GCCTTCCGGC GCGGGATCGG CCGCATCCAT CCCGTGGGCC GCACGGGCCA GCCCGAGGAG GTCGCGGCGC TGGTGGCCTG GCTCGCCTCG GACGAGGCGG CCTTCGTGAC CGGGCAGGTC TGGACCGTCG ACGGAGGGCG GATGGCGCAG CTGAGCCTGC CGCATGAGGA CTACTCGGCC GCAGCGCGCC ATTCCTTCCA GCGCAGATAG
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Protein sequence | MSRFEGRVAL VTGGGRGIGQ AIARRLASDG ARVFTAQRGA DAGFEAIAAD FADADAPARA VAEAVDRAGR LDVLVNNAGV MQEARVEEMA LADWERTIRV NLTAPFLAIR AALPHLRAVR GAIVNVGSIE GLGANPRHAA YCASKAGLHG LTRAVAVDHG AEGIRCNAVA PGWIETELNE AFVEAMPDPE AFRRGIGRIH PVGRTGQPEE VAALVAWLAS DEAAFVTGQV WTVDGGRMAQ LSLPHEDYSA AARHSFQRR
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