| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3961 |
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| Symbol | |
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| ID | 4013367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4153408 |
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| End bp | 4154139 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637943610 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_550753 |
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| Protein GI | 91789801 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.985096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTCC AGGGAAAAAC CGCACTGGTC ACGGCCGCCG GACAGGGCAT CGGAAAGGCC
ACCGCGCTGG CCATGGCGGC CGAGGGCGCC CAGGTGTGGG CTACCGACGT CAATGAGAAA
CTGCTCGCCG ATTACGCGGG CGTGCCCAAC ATCAAAACTG CGGCGCTCAA TGTGCTCGAC
AAGGCCGCCA TCCAGAAACT GGCGGCAGCG TTGCCACCGC TCAACGTGCT GTTCAACTGC
GCCGGCTTTG TCCACGCCGG CTCCATCCTG CAGGCCACCG ACGAAGACTG GGACTTTGCC
TTCAACCTCA ATGTGCGCTC GCAGTTCTGG ATGATCCAGG CGGTGCTGCC CAAGATGCTG
GCCCATGGCG GCGGCAGCAT CATCAACATG GCCAGCGTCT GCGGCTTCAA GGGCCTGCCG
AACCGCTTTG TCTATGGCGC CTCCAAGGCC GCGGTGACCG GCCTCACGAA ATGCGTGGCC
GCCGACTTCG TGACGCAGGG TGTGCGCTGC AATGCCATTT GCCCCGGTAC GGTCGACACC
CCTTCGCTGC AGGACCGCAT CAATGTGTTT GAAGACCCCG CCGAGGCGCG GAAAAACTTC
GTGGCGCGCC AGCCCATGGG GCGACTTGCA CAGGCCCATG AAATTGCGCC GCTGGTGGTG
TTTCTGGCCA GTGACGAATC GGCCTTTGTG ACCGGGCAGT CCTATGCCAT CGACGGCGGC
ATGACCATAT GA
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| Protein sequence | MRLQGKTALV TAAGQGIGKA TALAMAAEGA QVWATDVNEK LLADYAGVPN IKTAALNVLD
KAAIQKLAAA LPPLNVLFNC AGFVHAGSIL QATDEDWDFA FNLNVRSQFW MIQAVLPKML
AHGGGSIINM ASVCGFKGLP NRFVYGASKA AVTGLTKCVA ADFVTQGVRC NAICPGTVDT
PSLQDRINVF EDPAEARKNF VARQPMGRLA QAHEIAPLVV FLASDESAFV TGQSYAIDGG
MTI
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