| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1953 |
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| Symbol | |
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| ID | 1043099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2209753 |
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| End bp | 2210562 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637145358 |
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| Product | short chain dehydrogenase/reductase family oxidoreductase |
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| Protein accession | NP_744105 |
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| Protein GI | 26988680 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.660502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000443121 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTTTTC AAAACAAAAT CGTTGTGCTC ACAGGCGCAG CTTCTGGCAT CGGCAAAGCG
ACAGCACAGC TGCTAGTGGA GCAGGGCGCC CATGTGGTTG CCATGGATCT TAAAAGCGAC
TTGCTTCAAC AAGCATTCGG CAGTGAGGAG CACGTTCTGT GCATCCCTAC CGACGTCAGC
GATAGCGAAG CCGTGCGAGC CGCCTTCCAG GCAGTGGACG CGAAATTTGG CCGTGTCGAC
GTGATTATTA ACGCCGCGGG CATCAACGCA CCTACGCGAG AAGCCAACCA GAAAATGGTT
GATGCCAACG TCGCTGCCCT CGATGCCATG AAGAGCGGGC GGGCGCCCAC TTTCGACTTC
CTGGCCGATA CCTCGGATCA GGATTTCCGG CGCGTAATGG AAGTCAATTT GTTCAGCCAG
TTTTACTGCA TTCGAGAGGG TGTTCCGCTG ATGCGCCGAG CGGGTGGCGG CAGCATCGTC
AACATCTCCA GCGTGGCAGC GCTCCTGGGC GTGGCAATGC CACTTTACTA CCCCGCCTCC
AAGGCGGCGG TGCTGGGCCT CACCCGTGCA GCGGCAGCTG AGTTGGCACC TTACAACATT
CGTGTGAATG CCATCGCTCC AGGCTCTGTC GACACACCAT TGATGCATGA GCAACCACCG
GAAGTCGTTC AGTTCCTGGT CAGCATGCAA CCCATCAAGC GGCTGGCCCA ACCCGAGGAG
CTTGCCCAAA GCATCCTGTT CCTTGCCGGT GAGCATTCGT CCTTCATCAC CGGACAGACG
CTTTCTCCCA ACGGCGGGAT GCACATGTAA
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| Protein sequence | MSFQNKIVVL TGAASGIGKA TAQLLVEQGA HVVAMDLKSD LLQQAFGSEE HVLCIPTDVS
DSEAVRAAFQ AVDAKFGRVD VIINAAGINA PTREANQKMV DANVAALDAM KSGRAPTFDF
LADTSDQDFR RVMEVNLFSQ FYCIREGVPL MRRAGGGSIV NISSVAALLG VAMPLYYPAS
KAAVLGLTRA AAAELAPYNI RVNAIAPGSV DTPLMHEQPP EVVQFLVSMQ PIKRLAQPEE
LAQSILFLAG EHSSFITGQT LSPNGGMHM
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