| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3128 |
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| Symbol | |
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| ID | 3962524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3466725 |
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| End bp | 3467486 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917947 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_524368 |
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| Protein GI | 89901897 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.199274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTCAAG GTCGTTTGGA AGGTAAAACA GTGCTCATTA CTGCGGCGGC ACAGGGCATT
GGCCGCGCCA GCGCCTTGGC CTGCGCCGCC GAGGGTGCGC GCGTGATTGC CACCGACATC
AACCAGCAGT TTCTGGACAG TCTGGCCGCA GAGCATGCCG GCATTCAAGT CGCGCAACTG
GATGTGCGCA ACGACGCTGC CGTGACCGCA CTGGCTGCGC GCACCCCGGC GCTGGATGCC
TTGTTCAACT GCGCGGGCAT GGTGGCCAAT GGCAGCATGC TTGAATGCAG CGAGGCCGAT
TGGGATTTGA GCTTTGACCT GAACGTGAAA AGCATGTTCC GCATGACGCG AGCCTTCATG
CCCGCCATGC TGGCCAAAGC ACAAGCGGAG AACACCAGCG TGTCCATCAT CAACATGGCT
TCCATGGCAT CAAGCATCAA GGGCTTTGCC AACCGTTGTG CCTATGGTGC GACCAAGGCG
GCGGTGATTG GGCTGACGAA ATCGCTGGCG GCGGACTACG TGAAAGCCGG TTTGCGCGCC
AATGCGTTGT GCCCCGGCAC GGTGGATACA CCGTCTTTGC GCGGGCGCAT TGCCAACGCA
GCAGATCCGG TGCAAGCTGA AAAAGACTTC ATTGCCCGCC AACCCATGGG GCGCCTGGCG
ACGGTGACCG ACATCACGCC GATGGTGGTA TTCCTGGCGA GCGACGAGTC ACGCTTTGTC
ACCGGGCAGA CGCTGCTGGT GGACGGCGGC GTGACCATTT AA
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| Protein sequence | MCQGRLEGKT VLITAAAQGI GRASALACAA EGARVIATDI NQQFLDSLAA EHAGIQVAQL
DVRNDAAVTA LAARTPALDA LFNCAGMVAN GSMLECSEAD WDLSFDLNVK SMFRMTRAFM
PAMLAKAQAE NTSVSIINMA SMASSIKGFA NRCAYGATKA AVIGLTKSLA ADYVKAGLRA
NALCPGTVDT PSLRGRIANA ADPVQAEKDF IARQPMGRLA TVTDITPMVV FLASDESRFV
TGQTLLVDGG VTI
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