More than 300 homologs were found in PanDaTox collection
for query gene Slin_1029 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_1029  response regulator receiver sensor signal transduction histidine kinase  100 
 
 
371 aa  765    Spirosoma linguale DSM 74  Bacteria  normal  0.040723  normal 
 
 
-
 
NC_013132  Cpin_2260  response regulator receiver sensor signal transduction histidine kinase  55.65 
 
 
361 aa  383  1e-105  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.208609  normal 
 
 
-
 
NC_009507  Swit_5356  response regulator receiver sensor signal transduction histidine kinase  35.32 
 
 
377 aa  204  2e-51  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.940445 
 
 
-
 
NC_007517  Gmet_2639  response regulator receiver sensor signal transduction histidine kinase  32.56 
 
 
396 aa  196  7e-49  Geobacter metallireducens GS-15  Bacteria  normal  0.136447  normal  0.717158 
 
 
-
 
NC_013061  Phep_0585  ATP-binding region ATPase domain protein  33.68 
 
 
528 aa  191  1e-47  Pedobacter heparinus DSM 2366  Bacteria  normal  0.215545  normal 
 
 
-
 
NC_013216  Dtox_3783  histidine kinase  33.86 
 
 
544 aa  192  1e-47  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.401083  normal 
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  34.51 
 
 
363 aa  186  8e-46  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2448  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  31.59 
 
 
393 aa  177  2e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.760608  hitchhiker  0.00120668 
 
 
-
 
NC_011984  Avi_9098  bacteriophytochrome protein  31.66 
 
 
378 aa  178  2e-43  Agrobacterium vitis S4  Bacteria  normal  0.384054  n/a   
 
 
-
 
NC_013132  Cpin_0324  response regulator receiver sensor signal transduction histidine kinase  29.06 
 
 
424 aa  176  8e-43  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.046409  normal 
 
 
-
 
NC_004578  PSPTO_2715  sensor histidine kinase/response regulator  31.33 
 
 
393 aa  174  2.9999999999999996e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.615592  n/a   
 
 
-
 
NC_013440  Hoch_2075  response regulator receiver sensor hybrid histidine kinase  30.66 
 
 
572 aa  171  2e-41  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2590  response regulator receiver sensor signal transduction histidine kinase  31.7 
 
 
405 aa  168  1e-40  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.413696 
 
 
-
 
NC_007492  Pfl01_2649  response regulator receiver Signal transduction histidine kinase  30.29 
 
 
404 aa  167  2.9999999999999998e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.699737 
 
 
-
 
NC_008752  Aave_3993  response regulator receiver sensor signal transduction histidine kinase  31.66 
 
 
390 aa  167  4e-40  Acidovorax citrulli AAC00-1  Bacteria  normal  0.967169  normal 
 
 
-
 
NC_012791  Vapar_2802  response regulator receiver sensor signal transduction histidine kinase  31.68 
 
 
406 aa  166  9e-40  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3828  response regulator receiver sensor signal transduction histidine kinase  32.04 
 
 
392 aa  165  1.0000000000000001e-39  Delftia acidovorans SPH-1  Bacteria  normal  0.287383  normal  0.140943 
 
 
-
 
NC_010322  PputGB1_2145  response regulator receiver sensor signal transduction histidine kinase  30.26 
 
 
408 aa  165  2.0000000000000002e-39  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.001377 
 
 
-
 
NC_010501  PputW619_2109  response regulator receiver sensor signal transduction histidine kinase  30.69 
 
 
408 aa  164  3e-39  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0172  response regulator receiver sensor signal transduction histidine kinase  28.97 
 
 
395 aa  161  1e-38  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  31.85 
 
 
397 aa  161  2e-38  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_008782  Ajs_0650  response regulator receiver sensor signal transduction histidine kinase  29.89 
 
 
382 aa  160  2e-38  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1976  multi-sensor signal transduction histidine kinase  36.75 
 
 
1383 aa  160  3e-38  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.624185 
 
 
-
 
NC_011884  Cyan7425_3767  response regulator receiver sensor hybrid histidine kinase  30.45 
 
 
587 aa  160  4e-38  Cyanothece sp. PCC 7425  Bacteria  normal  0.634012  normal 
 
 
-
 
NC_002947  PP_3758  response regulator receiver sensor signal transduction histidine kinase  28.91 
 
 
408 aa  159  5e-38  Pseudomonas putida KT2440  Bacteria  normal  normal  0.734482 
 
 
-
 
NC_009441  Fjoh_3355  response regulator receiver sensor signal transduction histidine kinase  29.35 
 
 
405 aa  159  6e-38  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2005  response regulator receiver sensor signal transduction histidine kinase  28.91 
 
 
408 aa  159  9e-38  Pseudomonas putida F1  Bacteria  normal  normal  0.343751 
 
 
-
 
NC_006369  lpl2074  sensor histidine kinase  30.28 
 
 
816 aa  157  2e-37  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013061  Phep_4249  ATP-binding region ATPase domain protein  29.5 
 
 
374 aa  157  2e-37  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp2084  sensor histidine kinase  29.72 
 
 
816 aa  156  5.0000000000000005e-37  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_008576  Mmc1_3693  histidine kinase  28.39 
 
 
667 aa  156  6e-37  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1070  response regulator receiver sensor signal transduction histidine kinase  30.15 
 
 
402 aa  155  1e-36  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.947697  normal  0.86399 
 
 
-
 
NC_011992  Dtpsy_0629  response regulator receiver sensor signal transduction histidine kinase  29.33 
 
 
382 aa  154  2e-36  Acidovorax ebreus TPSY  Bacteria  normal  0.67365  n/a   
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  30.25 
 
 
374 aa  150  3e-35  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  30.25 
 
 
374 aa  150  3e-35  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_3898  multi-sensor signal transduction histidine kinase  31.02 
 
 
1003 aa  147  4.0000000000000006e-34  Polaromonas sp. JS666  Bacteria  normal  0.504038  normal  0.0804481 
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  29.62 
 
 
383 aa  147  4.0000000000000006e-34  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  30.05 
 
 
383 aa  145  8.000000000000001e-34  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1941  response regulator receiver sensor signal transduction histidine kinase  30.39 
 
 
395 aa  145  1e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0596409  n/a   
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  29.49 
 
 
384 aa  145  1e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_013173  Dbac_0019  response regulator receiver modulated diguanylate cyclase  49.65 
 
 
341 aa  144  4e-33  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0416556  n/a   
 
 
-
 
NC_007614  Nmul_A1289  multi-sensor signal transduction histidine kinase  32.95 
 
 
662 aa  143  4e-33  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1740  response regulator receiver sensor signal transduction histidine kinase  31.11 
 
 
377 aa  143  5e-33  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.129887 
 
 
-
 
NC_007413  Ava_1559  PAS/PAC sensor Signal transduction histidine kinase  33.61 
 
 
508 aa  142  6e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0906975 
 
 
-
 
NC_011729  PCC7424_4442  multi-sensor signal transduction histidine kinase  33.76 
 
 
1267 aa  142  9.999999999999999e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_2235  multi-sensor signal transduction histidine kinase  48.57 
 
 
716 aa  142  9.999999999999999e-33  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.530022  normal  0.014643 
 
 
-
 
NC_011729  PCC7424_5079  multi-sensor signal transduction histidine kinase  31.33 
 
 
695 aa  141  1.9999999999999998e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.929766 
 
 
-
 
NC_010571  Oter_0959  response regulator receiver sensor signal transduction histidine kinase  29.74 
 
 
372 aa  141  1.9999999999999998e-32  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_11588  two-component sensor histidine kinase  32.42 
 
 
403 aa  140  4.999999999999999e-32  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.339726  n/a   
 
 
-
 
NC_014230  CA2559_11543  sensory transduction histidine kinase  34.68 
 
 
952 aa  139  7e-32  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.166055  n/a   
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  29.4 
 
 
407 aa  139  1e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142048 
 
 
-
 
NC_007413  Ava_4783  PAS/PAC sensor hybrid histidine kinase  48.25 
 
 
680 aa  139  1e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  0.302794  normal 
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  30.87 
 
 
378 aa  138  1e-31  Opitutus terrae PB90-1  Bacteria  normal  normal  0.215089 
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  29.03 
 
 
395 aa  138  2e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_011891  A2cp1_4275  multi-sensor signal transduction histidine kinase  44.9 
 
 
712 aa  138  2e-31  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4252  multi-sensor signal transduction histidine kinase  44.9 
 
 
712 aa  137  3.0000000000000003e-31  Anaeromyxobacter sp. K  Bacteria  normal  0.374039  n/a   
 
 
-
 
NC_013440  Hoch_6238  histidine kinase  28.49 
 
 
519 aa  137  4e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.547868  normal 
 
 
-
 
NC_011729  PCC7424_1419  PAS/PAC sensor signal transduction histidine kinase  33.47 
 
 
831 aa  137  4e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008255  CHU_2077  sensor histidine kinase/response regulator fusion protein (sensor for arcA)  50 
 
 
492 aa  136  6.0000000000000005e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0651522  normal  0.191572 
 
 
-
 
NC_013132  Cpin_3745  response regulator receiver sensor signal transduction histidine kinase  28.57 
 
 
1010 aa  136  7.000000000000001e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.412805  hitchhiker  0.00597184 
 
 
-
 
NC_011729  PCC7424_3765  multi-sensor signal transduction histidine kinase  33.89 
 
 
562 aa  135  9.999999999999999e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.13531 
 
 
-
 
NC_006369  lpl2377  hypothetical protein  33.76 
 
 
425 aa  133  3.9999999999999996e-30  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013216  Dtox_3007  signal transduction histidine kinase, nitrogen specific, NtrB  43.62 
 
 
507 aa  132  6.999999999999999e-30  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.738719  normal 
 
 
-
 
NC_007760  Adeh_4121  multi-sensor signal transduction histidine kinase  43.54 
 
 
712 aa  132  6.999999999999999e-30  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.6651  n/a   
 
 
-
 
NC_006368  lpp2524  hypothetical protein  34.33 
 
 
425 aa  132  1.0000000000000001e-29  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013440  Hoch_2262  response regulator receiver sensor signal transduction histidine kinase  26.37 
 
 
406 aa  131  2.0000000000000002e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.146487 
 
 
-
 
NC_009831  Ssed_1645  hypothetical protein  49.22 
 
 
344 aa  131  2.0000000000000002e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  0.176846  normal 
 
 
-
 
NC_009012  Cthe_0286  response regulator receiver sensor signal transduction histidine kinase  25.86 
 
 
424 aa  131  2.0000000000000002e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.136894  n/a   
 
 
-
 
NC_013510  Tcur_2645  response regulator receiver protein  47.73 
 
 
215 aa  130  3e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.492308  n/a   
 
 
-
 
NC_009483  Gura_2000  response regulator receiver sensor signal transduction histidine kinase  28.97 
 
 
364 aa  129  8.000000000000001e-29  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000423497  n/a   
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  29.57 
 
 
383 aa  129  8.000000000000001e-29  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_011729  PCC7424_0500  response regulator receiver sensor signal transduction histidine kinase  30.08 
 
 
373 aa  129  8.000000000000001e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_4555  response regulator receiver sensor signal transduction histidine kinase  27.84 
 
 
406 aa  129  1.0000000000000001e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.330139  normal  0.677797 
 
 
-
 
NC_008042  TM1040_3795  periplasmic sensor signal transduction histidine kinase  29.06 
 
 
665 aa  129  1.0000000000000001e-28  Ruegeria sp. TM1040  Bacteria  normal  0.15018  normal 
 
 
-
 
NC_011666  Msil_2474  histidine kinase  27.16 
 
 
559 aa  127  2.0000000000000002e-28  Methylocella silvestris BL2  Bacteria  n/a    normal  0.369133 
 
 
-
 
NC_013037  Dfer_1132  PAS/PAC sensor hybrid histidine kinase  45.16 
 
 
647 aa  127  2.0000000000000002e-28  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0372822  normal  0.204987 
 
 
-
 
NC_013743  Htur_2774  multi-sensor signal transduction histidine kinase  31.51 
 
 
535 aa  127  2.0000000000000002e-28  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  29.48 
 
 
367 aa  127  3e-28  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1944  signal transduction histidine kinase  42.41 
 
 
507 aa  127  4.0000000000000003e-28  Chelativorans sp. BNC1  Bacteria  normal  0.0183597  n/a   
 
 
-
 
NC_013037  Dfer_3323  PAS/PAC sensor signal transduction histidine kinase  31.65 
 
 
445 aa  126  5e-28  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0667  response regulator receiver protein  42.07 
 
 
214 aa  126  6e-28  Frankia sp. EAN1pec  Bacteria  normal  0.0467725  normal  0.629252 
 
 
-
 
NC_013595  Sros_0400  response regulator receiver protein  39.53 
 
 
210 aa  126  6e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5387  response regulator receiver sensor signal transduction histidine kinase  27.3 
 
 
375 aa  126  7e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0971839 
 
 
-
 
NC_012848  Rleg_5110  histidine kinase  27.92 
 
 
558 aa  126  7e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.967716  normal  0.0814675 
 
 
-
 
NC_010623  Bphy_4207  response regulator receiver sensor signal transduction histidine kinase  28.97 
 
 
370 aa  125  8.000000000000001e-28  Burkholderia phymatum STM815  Bacteria  normal  normal  0.728065 
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  27.88 
 
 
369 aa  125  1e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_007952  Bxe_B1219  response regulator receiver sensor signal transduction histidine kinase  27.3 
 
 
375 aa  125  1e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.745377  normal  0.599724 
 
 
-
 
NC_007517  Gmet_2712  response regulator receiver sensor signal transduction histidine kinase  25.72 
 
 
414 aa  124  2e-27  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2687  response regulator receiver sensor signal transduction histidine kinase  26.09 
 
 
1013 aa  125  2e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.70216  normal 
 
 
-
 
NC_013730  Slin_1036  multi-sensor signal transduction histidine kinase  47.73 
 
 
527 aa  124  2e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_4048  response regulator receiver protein  48.06 
 
 
241 aa  125  2e-27  Frankia sp. CcI3  Bacteria  normal  0.916406  normal 
 
 
-
 
NC_010506  Swoo_1964  response regulator receiver sensor signal transduction histidine kinase  27.62 
 
 
427 aa  124  2e-27  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00543356  normal  0.092514 
 
 
-
 
NC_008700  Sama_3163  sensory box histidine kinase  30.97 
 
 
683 aa  125  2e-27  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5224  PAS/PAC sensor signal transduction histidine kinase  31.49 
 
 
374 aa  124  3e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3271  PAS/PAC sensor hybrid histidine kinase  27.82 
 
 
1691 aa  124  4e-27  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0143  response regulator receiver protein  47.33 
 
 
206 aa  123  5e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  29.28 
 
 
386 aa  123  6e-27  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2570  response regulator receiver sensor signal transduction histidine kinase  27.62 
 
 
381 aa  123  6e-27  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2393  response regulator receiver sensor hybrid histidine kinase  28.02 
 
 
518 aa  122  9e-27  Magnetococcus sp. MC-1  Bacteria  normal  0.991201  normal  0.0787545 
 
 
-
 
NC_009439  Pmen_3647  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  39.88 
 
 
715 aa  122  9.999999999999999e-27  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>