| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1559 |
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| Symbol | |
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| ID | 3682291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1918899 |
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| End bp | 1920425 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637716899 |
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| Product | PAS/PAC sensor Signal transduction histidine kinase |
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| Protein accession | YP_322077 |
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| Protein GI | 75907781 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0906975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAACTA CAAGCAATCA AACAAGTCCA GAGAGCGATC GCCACCCTGA AAATATAGCA
AAAATGGCTC CCGTTGGCAT ATTTCACGCA GACATATCCG GTAATTGTCT TTATGTCAAC
GAGCGTTGGT GTGAAATGTC TGGTCTTTCT AAAAAACAGT CATTGGGTCG AGGTTGGCAA
GTAGCTATTT ATCCAGATGA TTTGCAACTT ATAGAAGTGC AAGCCCAGTT TATTTTGTCA
AGACAGAAGT CATATAAAAC TGAGTTGCGC TTGCAAGATC CTCAAGGCAA AATTACTTGG
GTACTGTCAG AAGCAATAGC AGAAATTAAT GAAGATGGGC GGATAGTCGG CTATATCGGC
ACAGTAGTCG ATATTAGTGA ACGTCACCAG ATAGAAGAAG CATTGCGCGA AAGTGAAGAA
CGATTCGCAA TTATGGCGAA TAGCGCACCT GTGATGATTT GGATGTCAGG ACTAGACAAA
CTCTGCAATT TTTTTAATCA AGGCTGGCTA GACTTCACAG GACGCACAAT GGCAGAAGAA
TTAGGTAATG GTTGGGTAGA AGGGGTGCAT CCAGAAGACC GAGAACGCTG CATTCACACA
TATACTACAG CCTTTGAGCA TCGAGAAGTT TTCATGATGG AGTATCGCCT AAAACGTTTT
GATGGACAAT ATCGCTGGAT TTTCGATACA GGTACACCCA GATTTAATTC AGATGGTAGT
TTCGCTGGTT ACATAGGTTC CTGTGTTGAT ATTAACCCAC GTAAGCAAGT CGAAATTACA
CTCCAACAAC GAACCAAACA ACTGACACGC TTAAACACTA TCCTGGCGAA AACTACCACG
TTGTTGCAAC AACGTAATCA AGAGTTAGAC CAGTTTGCTT ATGTTGCATC CCATGATTTA
AAAGCACCTT TACGGGCGAT CGCTAGTTTA TCAGAATGGT TAGAAGAAGA CCTCGCTGAC
CAACTTCCTG AAGAAAATCA ACATCAAATG CAGTTGTTGC GGGGTCGGGT GCGGCGCATG
GAAGCCTTAA TTAATGGTCT ACTGGAATAT TCGCGTATTG GCCGCGTCCA CACAGAATTA
ACACAGGTCA ATGTGGACTC ATTACTCAGA GAAGTAATCG ACTCGTTGCA ACCACCAGCA
AGTTTTCAGA TTCAAATCCA GCCAAAAATG CCTACTTTAG TGACAAAGAG AGTTCCCTTA
CAACAGGTGT TCGCTAACTT AATCGAAAAT GCCATTGAAC ACCACACAGG GGTCGATGGT
AGGGTGAAAA TTTCGGTGCG AGATTTGGGG AAATACTACG AATTTAGTGT GGAAGATGAT
GGCCCTGGCA TACCTGTAGA ATATCACGAT AAGGTCTTTG TAATTTTCCA AACTCTCGAA
CCGCGCGATC GCAAAGAAAA TACGGGAATT GGGTTGGCGA TCGTCAAAAA AATTGTCGAG
ACGGAAGGGG GTTCCATTAA TTTGAAGCCT GTCTCTGGGC CTGGAAGTAC ATTTCGTTTT
ACTTGGCCTA AACGTTCTCT TGAGTAA
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| Protein sequence | MITTSNQTSP ESDRHPENIA KMAPVGIFHA DISGNCLYVN ERWCEMSGLS KKQSLGRGWQ
VAIYPDDLQL IEVQAQFILS RQKSYKTELR LQDPQGKITW VLSEAIAEIN EDGRIVGYIG
TVVDISERHQ IEEALRESEE RFAIMANSAP VMIWMSGLDK LCNFFNQGWL DFTGRTMAEE
LGNGWVEGVH PEDRERCIHT YTTAFEHREV FMMEYRLKRF DGQYRWIFDT GTPRFNSDGS
FAGYIGSCVD INPRKQVEIT LQQRTKQLTR LNTILAKTTT LLQQRNQELD QFAYVASHDL
KAPLRAIASL SEWLEEDLAD QLPEENQHQM QLLRGRVRRM EALINGLLEY SRIGRVHTEL
TQVNVDSLLR EVIDSLQPPA SFQIQIQPKM PTLVTKRVPL QQVFANLIEN AIEHHTGVDG
RVKISVRDLG KYYEFSVEDD GPGIPVEYHD KVFVIFQTLE PRDRKENTGI GLAIVKKIVE
TEGGSINLKP VSGPGSTFRF TWPKRSLE
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