| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3323 |
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| Symbol | |
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| ID | 8226901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4068836 |
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| End bp | 4070173 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931154 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003087699 |
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| Protein GI | 255037078 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCCA TGCAAACGCT CGAACTGACC GAAACCAATT ACCACCGGCT GTTGAAGCGG
CAAATCCGGA AATCGCTGCC GCCCGACCTA GCCGAACACC CCGACATACA AGATTTCCTA
CTGGCTGTAA ACCAGGCATA TACCGAATAC CAGGACGATC TGTCGCGCAT GGAACTGATC
CTGGAACAGA GTTCGGGAGA GCTTTTCAAG GCCAACCGCG AGCTTAGCCG CATTGCCCAG
GAAAAAACAG AAGAGGCTGC CCTTACCAGT AAAAGGCTCG AAGAAGTGGT AGGCAGCATT
TCGGAAGTGC TGGTGCAGCT CGATCGCGAC GGTAATTTCA CTTACCTGAA CCAGGCGTGG
GAAAGCATTA CCGGCTACCC GGTGAGCGCC AGCATGGGAC AAAGCTTCGC AGGTTTTTTC
CCAACCGCCG AAGCCAGGGA AAAAGTGACC GAAATACTCT CCCAGGAAAC CGAGGGAAAG
GAGGAAACGC TGCGGATTTA TACGGTGGGC GGCCAGGAAA AATGGCTGGG CGTTTCACTT
ACCCCTTATT TCAGCAACGG GCAGCACATT GGCTTTACCG GTACGCTCGC GGACGTGACC
GCACGGGTGA CCGCCGAAAC GAAACTAAAA TCCTACACCC GCGACCTCGA ACGCATTAAT
GCGGAGCTCG ACCAGTTTGC CTATGTGGTA AGCCACGACC TGAAAGCGCC GCTGCGGGCG
ATCAACAACC TCTCCGAGTG GATCGAAGAG GACATTGCCG ATATGCTCGA AGGCGAAACG
AAGGACCAGT TCCGGCTGCT GCGCGGGCGC GTTCACCGGA TGGAGAACCT TATCAACGGC
ATCCTGTCCT ACTCGCGCGC CGGAAGAATG AAAACCGTGA AGGAGAAGTT CGTGATCAGA
GGACTGGTGG ACGAGCTGTG CGAATCTTTC AGCACCAAAA AGCCGCTTTC TTTCAGCATT
GAGGGCGACG CATCTATGGA AATCGAGGCG GAGAAGATCG CATTGACGCA GATTCTCCAA
AACCTCGTTT CCAATGGGAT CAAATACAAT GATAAAGATG AAATCCGCAT CAGCGTCGGC
TGGAAGGACC TTGGGAAAGA GTACGAATTT CACGTCGGCG ACAATGGTCC CGGCATCAGC
CCCGAGTTCC ACGAACGCAT ATTCGTCATT TTCCAGACGC TTCAGGCGCG CGACGAGGTA
GAAAGCACCG GCGTAGGACT CGCGATCGTC AAAAAAATAC TCGACGAAAA GCACAGCAAG
ATCCGCATCG ACTCGGTAAT GGGCGTCGGC ACGACTTTTT ACTTTACCTG GCCGAAAAAC
GAAGCAAAAG ACATTTGA
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| Protein sequence | MTPMQTLELT ETNYHRLLKR QIRKSLPPDL AEHPDIQDFL LAVNQAYTEY QDDLSRMELI
LEQSSGELFK ANRELSRIAQ EKTEEAALTS KRLEEVVGSI SEVLVQLDRD GNFTYLNQAW
ESITGYPVSA SMGQSFAGFF PTAEAREKVT EILSQETEGK EETLRIYTVG GQEKWLGVSL
TPYFSNGQHI GFTGTLADVT ARVTAETKLK SYTRDLERIN AELDQFAYVV SHDLKAPLRA
INNLSEWIEE DIADMLEGET KDQFRLLRGR VHRMENLING ILSYSRAGRM KTVKEKFVIR
GLVDELCESF STKKPLSFSI EGDASMEIEA EKIALTQILQ NLVSNGIKYN DKDEIRISVG
WKDLGKEYEF HVGDNGPGIS PEFHERIFVI FQTLQARDEV ESTGVGLAIV KKILDEKHSK
IRIDSVMGVG TTFYFTWPKN EAKDI
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