Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1029 |
Symbol | |
ID | 8724759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1249749 |
End bp | 1250864 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_003385879 |
Protein GI | 284035949 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.040723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCCA GCCTCACTAA CAATACAAGT CCGTTTACCA TACTTCTTGT GGACGACCGG GACGAAAACC TGCTCGTTCT GGAAGAACTT CTGGACAATG GAAACCGGCA GTTTATCAAA GCAACCTCGG GCAATGAAGC CCTGAAGTAC GCCCTGAAGA ATGATCAGAT CGGGCTTATC ATGCTGGATG TTCAGATGCC GGAAATGGAC GGCTTTGAAG TAGCCAAATT CCTGAAAGCC AGTCCCAGAA CCCGCGACAT ATCGATCATA TTCGTCACGG CCATCAACAA GGAGGAACAA TACGTACTGA AAGGCTTCGA AGAAGGAGCT GTCGATTATT TATCCAAGCC GCTGGACAGC AATGTTACAA AGGCCAAAGT CAATGTCTTC GAACAGTTAT GGCGCTCACA ACAGGCTTTA AAAAAGTCGG CCAGCGATCT TGCGGCCATT AATAAGCAGT TGGAGAAGTT TGTTTACATG GTGGCGCATG ACCTTAAATC GCCCCTAACC GGCCTGCTCA CCCTGCTGCA TCTGGTCGAA AGCACGAATG AAAGTCGTCC TATGCAACAG GATGAATTGG CCAATTACCT GAGTTACCTG AAGGAAGCTG GTTACCATCA GTCAACAATG ATCAGCAGCA TTCTCGAATA CTCACGGCAA AGTATAGATC AGCAGGCATC GGAGCAGGTA GATGTGGCTC AGCTGCTGTC GCAGACGACT AAACTGTTGT TTCCGCCTAA ACACATACAG ATTCATATTG TCGAGCCCAT GCCAGTGCTG TACACAAAAA AAATAAAGTT GCAGCAGGTG TTCCAGAACC TGCTTAGCAA TGCCATAAAG TACAACGACA AAGCCCAGGG ACAGATTGAA ATCGGCCATA CGGACAAGGA AAACTTTATT GAATTTTATG TCCGGGACAA TGGTCCCGGC ATGACGATAG AGCAGCAGGC AAAACTCTTC GCCCTTTTCC GGCCAGTTGG TCATTCGCAG CATGAGAGCA GTACGGGCGT GGGGCTAAAT ACCCTCAAAA TGCTCGTTGA AGAACAGGGC GGTTCCTTAC GGGTAAACAC CTCACCGGGC GAAGGGTGTA CCGTACTCTT CGGCTGGAGA AAGTAG
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Protein sequence | MTSSLTNNTS PFTILLVDDR DENLLVLEEL LDNGNRQFIK ATSGNEALKY ALKNDQIGLI MLDVQMPEMD GFEVAKFLKA SPRTRDISII FVTAINKEEQ YVLKGFEEGA VDYLSKPLDS NVTKAKVNVF EQLWRSQQAL KKSASDLAAI NKQLEKFVYM VAHDLKSPLT GLLTLLHLVE STNESRPMQQ DELANYLSYL KEAGYHQSTM ISSILEYSRQ SIDQQASEQV DVAQLLSQTT KLLFPPKHIQ IHIVEPMPVL YTKKIKLQQV FQNLLSNAIK YNDKAQGQIE IGHTDKENFI EFYVRDNGPG MTIEQQAKLF ALFRPVGHSQ HESSTGVGLN TLKMLVEEQG GSLRVNTSPG EGCTVLFGWR K
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