Gene Slin_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1029 
Symbol 
ID8724759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1249749 
End bp1250864 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content49% 
IMG OID 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_003385879 
Protein GI284035949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.040723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCA GCCTCACTAA CAATACAAGT CCGTTTACCA TACTTCTTGT GGACGACCGG 
GACGAAAACC TGCTCGTTCT GGAAGAACTT CTGGACAATG GAAACCGGCA GTTTATCAAA
GCAACCTCGG GCAATGAAGC CCTGAAGTAC GCCCTGAAGA ATGATCAGAT CGGGCTTATC
ATGCTGGATG TTCAGATGCC GGAAATGGAC GGCTTTGAAG TAGCCAAATT CCTGAAAGCC
AGTCCCAGAA CCCGCGACAT ATCGATCATA TTCGTCACGG CCATCAACAA GGAGGAACAA
TACGTACTGA AAGGCTTCGA AGAAGGAGCT GTCGATTATT TATCCAAGCC GCTGGACAGC
AATGTTACAA AGGCCAAAGT CAATGTCTTC GAACAGTTAT GGCGCTCACA ACAGGCTTTA
AAAAAGTCGG CCAGCGATCT TGCGGCCATT AATAAGCAGT TGGAGAAGTT TGTTTACATG
GTGGCGCATG ACCTTAAATC GCCCCTAACC GGCCTGCTCA CCCTGCTGCA TCTGGTCGAA
AGCACGAATG AAAGTCGTCC TATGCAACAG GATGAATTGG CCAATTACCT GAGTTACCTG
AAGGAAGCTG GTTACCATCA GTCAACAATG ATCAGCAGCA TTCTCGAATA CTCACGGCAA
AGTATAGATC AGCAGGCATC GGAGCAGGTA GATGTGGCTC AGCTGCTGTC GCAGACGACT
AAACTGTTGT TTCCGCCTAA ACACATACAG ATTCATATTG TCGAGCCCAT GCCAGTGCTG
TACACAAAAA AAATAAAGTT GCAGCAGGTG TTCCAGAACC TGCTTAGCAA TGCCATAAAG
TACAACGACA AAGCCCAGGG ACAGATTGAA ATCGGCCATA CGGACAAGGA AAACTTTATT
GAATTTTATG TCCGGGACAA TGGTCCCGGC ATGACGATAG AGCAGCAGGC AAAACTCTTC
GCCCTTTTCC GGCCAGTTGG TCATTCGCAG CATGAGAGCA GTACGGGCGT GGGGCTAAAT
ACCCTCAAAA TGCTCGTTGA AGAACAGGGC GGTTCCTTAC GGGTAAACAC CTCACCGGGC
GAAGGGTGTA CCGTACTCTT CGGCTGGAGA AAGTAG
 
Protein sequence
MTSSLTNNTS PFTILLVDDR DENLLVLEEL LDNGNRQFIK ATSGNEALKY ALKNDQIGLI 
MLDVQMPEMD GFEVAKFLKA SPRTRDISII FVTAINKEEQ YVLKGFEEGA VDYLSKPLDS
NVTKAKVNVF EQLWRSQQAL KKSASDLAAI NKQLEKFVYM VAHDLKSPLT GLLTLLHLVE
STNESRPMQQ DELANYLSYL KEAGYHQSTM ISSILEYSRQ SIDQQASEQV DVAQLLSQTT
KLLFPPKHIQ IHIVEPMPVL YTKKIKLQQV FQNLLSNAIK YNDKAQGQIE IGHTDKENFI
EFYVRDNGPG MTIEQQAKLF ALFRPVGHSQ HESSTGVGLN TLKMLVEEQG GSLRVNTSPG
EGCTVLFGWR K