| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4442 |
|---|
| Symbol | |
|---|
| ID | 7111165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 4924035 |
|---|
| End bp | 4927838 |
|---|
| Gene Length | 3804 bp |
|---|
| Protein Length | 1267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643482660 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002379674 |
|---|
| Protein GI | 218441345 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACCC ATTATCGTCC TCAAACACAA CGTTATAGCA TCGCAGTTTT ATCCGTCATT
ATCGCTTTAG GATTGATGTT ACTGCTCGAT CCTTGGATGC CGATGGAAAC ATCTCCTTTT
TTAGTCTTTT TCGTCGCTGT AACAGTGAGT GCTTGGTATG GGGGGATAAA ACCGGGATTA
GTTGCCACGT TTTTATCAGC AATTGCCAGT TATTATTGGT TTTTTATCCC CAAAGAAACT
TGGGATATAA GTACAGCCGA TGCTTTCCGT CTCATGATTT TTATTCTTGA ATGTATTTTA
ATTTCTATTT TGTGTGAAGC CTTGCATCAA GCTAAACGAA AAGTCGAAAT TAATTTACAC
TCTCTTCAAC AAAAAGAGTC CATGCTTGAG AAAGCAAATA CTCAAGTTTC TCGAATTCTA
GAAAGCATTG GAGAAGGATT TTTTGCTTTA GATTATCAGT GGAACTTTAC CTATATTAAC
AATCCCGGTG AAATCATTTT TAAGCAATCT CGGCAAACCT TAGAAGGAAA AAATATTTGG
CAAATCCTGC CCGAAATTGA GGGGACTGTT TATGAACAAT TTCATCGGGC AATTAAAGAA
CAAATTCCTA TCTGTTTAGA GCAAAATATT TTTACTGAAT CTAATCAATT TTACGAAATA
CGAGCTTATC CAGTTTCAGA AGGATTAGCC GTCTATTTGT TGGATGTGAC AGAGCGCCGA
TTAGCTGCCT TACAATTAAA AGAATCAGAG TTACGCTTTC GACAATTAGC AGAAAATATC
AGCAAAGTTT TTTGGATTTC TGACCTTGAA AAGTCTGAAA TTCTCTATGT TAGTCCGGCT
TATGAAAGGA TTTGGGGAAA AAGCTGTGAG AGTCTTTATC AATATCCCTC GTCTTGGTTA
GAAGCGGTTC ATCCAGAGGA TCGAAACCGA GTTAATTTAG CCATTAGCCA AATGAAAAAC
GGGGAACAAG ATTTTAAAGA AGATTATCGA ATTATTCGCC CCGATGGTCA AATTCGTTGG
ATAGGAGCAA GAACTTTTCC GATTTATGAT GAAAATGGGA AAAGATATCG AATTGCCGGT
TTTGCAGAAG ATATAACAGA ACGAAAACGA GCAGAACAAG CGCTCCAAGA AAGTGAACGG
CGTTTCCGTC GGTTAGTAGA ATCTAATCTT TTTGGAGTGG CATTTGCTAA TATTGCTGGT
AGGCTTCACT ACGCCAATGA TTACTATCTC AACATGGTAG GATATAGCCG AGAAGACTTG
GAAAATGGGT TAATTCAGTG GAATCAGATG ACTCCTCCAG AATGGTTAGA TTTAGACTTT
AAAGCTTTAG AAGAAATGAA AGTTAAAGGA GTGACAACCC CCTTTGAAAA AGAATATCTT
CGTAAAGACG GAAGTCGTGT TCCTATCCTC ATTGGGGCAG CTTTTTTAGA TGAACCCTAC
GAAATTGCTC AAGAAATGAT CGGCTTCTTT TTAGATTTAA CTCGACTCAA AGAAACAGAA
AAAGCGTTAC AACAACGAGA AGAAGAATTA CGCTTAATTG CCGATGCTAC CCCGGCTTTA
ATTGCTTATG TAGATTCTCA TCAACGCTAT CGGTTTAATA ATCGTCGTTA TGAGGAATGG
TTTGGTGTTC CCATTGACCA AATTTCGGGT AAAACCTTAC AAGAATTTTT AGGGGATTCT
CTGTATGAAA AAGTTCGTCC TCGCATCGAG AAGGTATTAA AGGGAGAACA AGTTATTTAT
GAAGAAGAAA TTACTCTACC TAACTCAGAA TCTCGCTACA TTAGAGCTAA TTATATGCCT
CGATTTGACT CTCAAGGTAA AGTAGAAGGA TTTGTCGCTT TAATTAATGA TTTTAGCGAT
CGAAAACGAA TGGAAGATAA CTTACGGGAA AGTGAAGAAC GGTTTCGGAT GATGGCGAAT
AGTTCCCCCG TGATGATTTG GTTAACCGAT GAAACAGCCG GATGTATTTT TGTCAATCAA
ACATGGTTAA ACTTAACCGG CAGAACCCTT GAGCAAGAAT TAGGAGAGGG TTGGACTGAT
AATATACATC CAGAAGATCT TTCCTATGTT TTAGAAGATT ATTTACAGGC ATTTAACACC
CGTCAGCCTT ATGAAATGCA ATATCGGGTT AAATCTGCCA ATGGCGACTA TCGTTGGATT
TTAGAAAGGG GGAGTCCTCG ATTTACCCCA GAAGGGAAAT TTAGCGGTTA TATTGGTTCT
TGTACCGATG TCACAGAACG ACAACAGGCA ATACAAGCCC TACAACAGAG CGAACAAGCC
CTACAACAAC ACGCCCAAAT GTTAGACTTA GCTAATGATA GTATTATCAT TCGGGATCTT
AATGAAGCGA TCGCTTATTG GAATCATGGA GCAGAACGTC TCTATGGTTG GACAAAAACC
GAAGCAGAAG GACACCAAAT TCATAATTTA CTCAAAACCA TTTTTCCTCA ACCTAAGACG
GAAATTTACT CTATCCTAAC TCGTCAAGGA TACTGGCAAG GAGAACTCAC CCAAACTAAA
CAAGATGGTA GTCAAATTAT CGTCAGTAGT CGTTGGACGC TACAATATAA CTCACAAGGG
CAAGCGATCG CTATTCTGGA AATTAGTGAT GATATTACTG AGCGCAAACA GGTAGAAGCC
GCGTTACGAG TCAGTGAAGA ACGGTTTCGG GCTATTTTTG AACAAGCCGC CGTCGGGATG
TCTCTTCTCA ATTTAGACGG TCGATGGTTA CGAGTCAATC AAAAACTTTG TGAAATTACA
GGCTATACTC AAGAAGAATT ATTACAAAAA ACTTTTCAAG ATATTACCTA CCCCGAGGAT
CTCGAAACCG ATCTTAATTA TGTCAGTAAA CTGCTGGCCG GAGAGATTGA AACTTACTCC
CTCGAAAAAC GTTATATTCG TCAAGATAAA TCCTTAATTT GGGTTGAAAT CACCGTGTCA
TTGATGTGGG ATCAGACTCA ATCAAAGTCT TCCTCAAAAG TCCCTAAACC CCAATATTTT
ATCACGGTTA TTGAAGATAT TAGCGAGGCA AAACGGGGAG AAATAGAACG CCAACAAGCG
CAAATTGCCT TACAAGAACG CGCTAAAGAA CTTACCTCCC TCAATACGGT TTTGGCGAGT
ACCACGACAA TGTTACAAAA ACGCAATCAA GAATTAGATC AATTTGCCTA TGTCGTCTCT
CATGATCTTA AAGCACCTCT ACGAGCGATC GCTAATTTAT CGGAATGGAT AGAAGAAGAT
CTTGAGGGAC AACTTCCCCC AGAAAATCAA GAACAGTTGC AATTACTTAG ACAGCGAGTT
CATCGCATGG AAAATTTAAT TAATGGGGTA TTAGAATACT CTCGCGTCGG ACGCAAAGAA
ACCAAAATAG AGACTTTTTC AGTGGATGAG TTATTAACAG AAGTCATTGA TTCATTGTCT
CCCCCTCCTA CGTTTACCGT TGAAATTGGG GAAGGTATGC CAACGTTAAC GACTTCTAAA
GTCTTTTTAG CTCAGATCTT TTCTAATTTA ATCAGCAATG GAATTAATCA TTATCCGGGT
TCTGATGGTC ATCTATGGAT TAGGGTTAAA GAGTTAGATA AATTTTACGA ATTTGCTGTT
GCTGATAATG GGAAAGGAAT TGCCCCAGAA TATCATCAGC GAATTTTTGG CATTTTTCAA
ACCTTAGAAA AATCAGAAAA CCTCGAAAGT ACAGGCATTG GTTTGGCCAT CGTTAAGAAA
ATTATCGAAT ATCAAGGCGG GAATATTAAA GTTGAGTCAG AACTAGGTCA AGGGACAACT
TTCCGCTTTA CTTGGCCTAA GTAG
|
|---|
| Protein sequence | MLTHYRPQTQ RYSIAVLSVI IALGLMLLLD PWMPMETSPF LVFFVAVTVS AWYGGIKPGL
VATFLSAIAS YYWFFIPKET WDISTADAFR LMIFILECIL ISILCEALHQ AKRKVEINLH
SLQQKESMLE KANTQVSRIL ESIGEGFFAL DYQWNFTYIN NPGEIIFKQS RQTLEGKNIW
QILPEIEGTV YEQFHRAIKE QIPICLEQNI FTESNQFYEI RAYPVSEGLA VYLLDVTERR
LAALQLKESE LRFRQLAENI SKVFWISDLE KSEILYVSPA YERIWGKSCE SLYQYPSSWL
EAVHPEDRNR VNLAISQMKN GEQDFKEDYR IIRPDGQIRW IGARTFPIYD ENGKRYRIAG
FAEDITERKR AEQALQESER RFRRLVESNL FGVAFANIAG RLHYANDYYL NMVGYSREDL
ENGLIQWNQM TPPEWLDLDF KALEEMKVKG VTTPFEKEYL RKDGSRVPIL IGAAFLDEPY
EIAQEMIGFF LDLTRLKETE KALQQREEEL RLIADATPAL IAYVDSHQRY RFNNRRYEEW
FGVPIDQISG KTLQEFLGDS LYEKVRPRIE KVLKGEQVIY EEEITLPNSE SRYIRANYMP
RFDSQGKVEG FVALINDFSD RKRMEDNLRE SEERFRMMAN SSPVMIWLTD ETAGCIFVNQ
TWLNLTGRTL EQELGEGWTD NIHPEDLSYV LEDYLQAFNT RQPYEMQYRV KSANGDYRWI
LERGSPRFTP EGKFSGYIGS CTDVTERQQA IQALQQSEQA LQQHAQMLDL ANDSIIIRDL
NEAIAYWNHG AERLYGWTKT EAEGHQIHNL LKTIFPQPKT EIYSILTRQG YWQGELTQTK
QDGSQIIVSS RWTLQYNSQG QAIAILEISD DITERKQVEA ALRVSEERFR AIFEQAAVGM
SLLNLDGRWL RVNQKLCEIT GYTQEELLQK TFQDITYPED LETDLNYVSK LLAGEIETYS
LEKRYIRQDK SLIWVEITVS LMWDQTQSKS SSKVPKPQYF ITVIEDISEA KRGEIERQQA
QIALQERAKE LTSLNTVLAS TTTMLQKRNQ ELDQFAYVVS HDLKAPLRAI ANLSEWIEED
LEGQLPPENQ EQLQLLRQRV HRMENLINGV LEYSRVGRKE TKIETFSVDE LLTEVIDSLS
PPPTFTVEIG EGMPTLTTSK VFLAQIFSNL ISNGINHYPG SDGHLWIRVK ELDKFYEFAV
ADNGKGIAPE YHQRIFGIFQ TLEKSENLES TGIGLAIVKK IIEYQGGNIK VESELGQGTT
FRFTWPK
|
|---|
| |