| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2077 |
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| Symbol | arcB |
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| ID | 4183456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2424034 |
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| End bp | 2425512 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638072077 |
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| Product | sensor histidine kinase/response regulator fusion protein (sensor for arcA) |
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| Protein accession | YP_678682 |
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| Protein GI | 110638473 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0651522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.191572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGAGG GTAAAGCCAA TATTTTAATC ATTGATGATA TTTCAAGTAA CATATTTGCA
CTTGAAAATC TATTAATGAC AGAAAATCGT ACTTTTTTTA AAGCAACCTC TGGAGATGAA
GGATTAAAAC TTGCTTTAAG TAAGCCGGTT GATCTTATCA TTCTGGATGT ACAAATGCCG
GAAATGGATG GCTTTGAAGT AGCGAACATG CTTAAGTCAA ATAAGCGTAC CAAAGATATT
CCGATTTTAT TTGCATCTGC TGAATTAAAG GAGCAGAAAA ATATGCTGAA AGGTCTGGAA
GAAGGCGCGA TTGATTATTT ATTTAAACCG CTTGACCCGG AGATTACCAA GGCAAAAGTG
AATATGCTTA TCCGCCTTGA ATTACAGCGC AAGGAGATGG TGGAAATAAA CAGTGCCTTA
GAAAAGTCTG CCATCCTTAT CAATAACTGC CTGGACATCA TTTGCACCAT TGATGCGGAA
ACCTTTAAGT TTGAAGCCTT CAATGTTGCC ATGACAAATG TGCTGGGCTA TTCAAGCGAA
GAAATTACCA GCCAGTCTTT ATTATTTTTT CTTCAGGAGT CTGACCGGGA GTTTATAAAG
AACCTGAAAA AATCGGATTC AAATACTGGT TCGTTTGAAA TACAGATCAT CTGTAAAGAT
TCATCTATTA AATGGCTTCA GTGGAACATT GTTGTTAAAG GTGGAAAATG GTTTTCAAAT
GCCCGTGATA TTACTGAGCG CAAGAAAAAA GACGATGAAA TTATACGCCT GAATCAGGAT
CTTCATGAAA ATATTCAGCA ACTGGAAAAT GCAAATAAAG AACTGGAATC CTTTTCGTAT
TCTGTTTCTC ATGACTTGCG TGCTCCGTTG CGTTCTATCA ACAACTACGC ACAAATGCTT
GAAGATGCCT TTGCTGCGCA GATGGACGAA AAATCAACCC GCCTGTTGGG AAACATCAAG
CGTAATGCCT TCCGGATGGA TACATTGATT GATGACCTGC TTGCGTTCTC CCGGTTGGGA
AGAAAGCCTG TACAGAAGCA GTCGATTAAT ATGAACGACC TGGTACAACA TGTGTATGCA
GATATGCAAG GTACCTTCAA GGGAGAATTT GTTCTTCCTG CGCTGCCGGA TATTGATGCA
GATTATAATC TGTTAAAACA GGTTGTGGTT AACCTGCTTT CCAATGCCAT TAAATATTCA
GGTAAAATAG AAGAACCCAG AATTGAAGTT GGCTATACAA AGAACCCAAA TGCAGTTGTT
TACTACATCA AGGATAACGG TGCAGGTTTC GACATGGAAT ACAGCGATAA ACTGTTTGGT
GTCTTCCAAC GCCTCCATAG TACAAAAGAA TTTGAAGGGA CCGGTGTTGG CCTGGCGATT
GTAAAACGGA TTGTTGAAAA ACATGGGGGC ACCATATGGG CAGAAGCAAA AGTAGGAGAG
GGTGCAACGT TTTATTTTTC ATTACCTGCT CCTGTATAA
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| Protein sequence | MKEGKANILI IDDISSNIFA LENLLMTENR TFFKATSGDE GLKLALSKPV DLIILDVQMP
EMDGFEVANM LKSNKRTKDI PILFASAELK EQKNMLKGLE EGAIDYLFKP LDPEITKAKV
NMLIRLELQR KEMVEINSAL EKSAILINNC LDIICTIDAE TFKFEAFNVA MTNVLGYSSE
EITSQSLLFF LQESDREFIK NLKKSDSNTG SFEIQIICKD SSIKWLQWNI VVKGGKWFSN
ARDITERKKK DDEIIRLNQD LHENIQQLEN ANKELESFSY SVSHDLRAPL RSINNYAQML
EDAFAAQMDE KSTRLLGNIK RNAFRMDTLI DDLLAFSRLG RKPVQKQSIN MNDLVQHVYA
DMQGTFKGEF VLPALPDIDA DYNLLKQVVV NLLSNAIKYS GKIEEPRIEV GYTKNPNAVV
YYIKDNGAGF DMEYSDKLFG VFQRLHSTKE FEGTGVGLAI VKRIVEKHGG TIWAEAKVGE
GATFYFSLPA PV
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