More than 300 homologs were found in PanDaTox collection
for query gene Rleg_5742 on replicon NC_012853
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012853  Rleg_5742  response regulator receiver protein  100 
 
 
131 aa  265  1e-70  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2381  response regulator receiver protein  48.7 
 
 
124 aa  115  3e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5523  response regulator receiver protein  47.11 
 
 
122 aa  112  1.0000000000000001e-24  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2399  response regulator receiver protein  45.9 
 
 
128 aa  110  6e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0182  response regulator receiver domain-containing protein  45.69 
 
 
129 aa  108  3e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.622103  normal 
 
 
-
 
NC_008009  Acid345_3714  response regulator receiver protein  41.32 
 
 
256 aa  108  3e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.400104  normal 
 
 
-
 
NC_008009  Acid345_3728  response regulator receiver protein  46.15 
 
 
117 aa  108  4.0000000000000004e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2681  response regulator receiver protein  44.07 
 
 
121 aa  106  1e-22  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007492  Pfl01_2250  response regulator receiver domain-containing protein  44.07 
 
 
123 aa  103  5e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0811  two-component response regulator  42.4 
 
 
209 aa  102  1e-21  Methylibium petroleiphilum PM1  Bacteria  normal  0.184612  normal 
 
 
-
 
NC_008825  Mpe_A2536  two component regulator  47.41 
 
 
204 aa  103  1e-21  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.378867 
 
 
-
 
NC_010552  BamMC406_4620  response regulator receiver protein  43.14 
 
 
128 aa  100  4e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4618  two component LuxR family transcriptional regulator  37.5 
 
 
224 aa  98.6  3e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3511  two component transcriptional regulator, LuxR family  40.5 
 
 
209 aa  97.4  6e-20  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2871  response regulator receiver protein  40.46 
 
 
206 aa  95.5  2e-19  Pseudomonas putida F1  Bacteria  normal  0.313361  normal  0.346414 
 
 
-
 
NC_009621  Smed_5521  response regulator receiver protein  42.34 
 
 
120 aa  95.5  2e-19  Sinorhizobium medicae WSM419  Bacteria  normal  0.0747322  normal 
 
 
-
 
NC_007778  RPB_0212  response regulator receiver domain-containing protein  43.97 
 
 
137 aa  94.7  3e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_5150  response regulator receiver protein  38.26 
 
 
122 aa  94.4  4e-19  Pseudomonas putida F1  Bacteria  normal  normal  0.56838 
 
 
-
 
NC_002947  PP_5240  response regulator  38.26 
 
 
122 aa  93.6  9e-19  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00709  nodulation protein  40.52 
 
 
200 aa  92.8  1e-18  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  hitchhiker  0.00695869  n/a   
 
 
-
 
NC_009485  BBta_7459  nodulation protein W, two-component transcriptional regulator  41.04 
 
 
219 aa  92.8  1e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010679  Bphyt_7251  response regulator receiver protein  35.34 
 
 
133 aa  92.4  2e-18  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_5088  LuxR response regulator receiver  39.67 
 
 
212 aa  91.7  3e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2317  two component LuxR family transcriptional regulator  40.68 
 
 
209 aa  91.7  3e-18  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2885  response regulator receiver domain-containing protein  37.07 
 
 
123 aa  91.7  3e-18  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.514979 
 
 
-
 
NC_010625  Bphy_5691  response regulator receiver protein  41.35 
 
 
127 aa  92  3e-18  Burkholderia phymatum STM815  Bacteria  normal  normal  0.263538 
 
 
-
 
NC_007492  Pfl01_2452  response regulator receiver domain-containing protein  36.52 
 
 
140 aa  90.9  5e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.927738 
 
 
-
 
NC_010002  Daci_1553  two component LuxR family transcriptional regulator  38.28 
 
 
212 aa  90.5  7e-18  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1743  two component LuxR family transcriptional regulator  40.87 
 
 
209 aa  89.7  1e-17  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.518394 
 
 
-
 
NC_012858  Rleg_6855  response regulator receiver protein  38.33 
 
 
124 aa  88.6  2e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.508442  normal 
 
 
-
 
NC_008009  Acid345_3729  two component LuxR family transcriptional regulator  40.52 
 
 
209 aa  89.4  2e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1268  two component LuxR family transcriptional regulator  37.82 
 
 
220 aa  89.4  2e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010679  Bphyt_7266  response regulator receiver protein  44.79 
 
 
122 aa  88.6  2e-17  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5186  two component LuxR family transcriptional regulator  39.5 
 
 
214 aa  88.2  3e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.0233056 
 
 
-
 
NC_010515  Bcenmc03_5090  two component LuxR family transcriptional regulator  39.5 
 
 
214 aa  88.2  3e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.159727  normal 
 
 
-
 
NC_008061  Bcen_3181  two component LuxR family transcriptional regulator  39.5 
 
 
214 aa  88.2  3e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.246114  n/a   
 
 
-
 
NC_009507  Swit_5293  two component LuxR family transcriptional regulator  34.19 
 
 
203 aa  87.4  5e-17  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2358  response regulator receiver protein  35.16 
 
 
233 aa  87.8  5e-17  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.119902  normal  0.5156 
 
 
-
 
NC_007794  Saro_1578  two component LuxR family transcriptional regulator  36.67 
 
 
207 aa  87.4  6e-17  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.661779  n/a   
 
 
-
 
NC_009720  Xaut_3389  response regulator receiver protein  38.79 
 
 
211 aa  87.4  6e-17  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0845  response regulator receiver protein  38.02 
 
 
183 aa  87  7e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5456  two component transcriptional regulator, LuxR family  40 
 
 
230 aa  86.7  1e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.154935  hitchhiker  0.00976207 
 
 
-
 
NC_007492  Pfl01_2459  two component LuxR family transcriptional regulator  39.13 
 
 
215 aa  86.3  1e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0944  response regulator receiver protein  40.32 
 
 
136 aa  86.7  1e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2139  two component transcriptional regulator, LuxR family  37.5 
 
 
213 aa  86.3  1e-16  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2400  two component transcriptional regulator, LuxR family  39.5 
 
 
210 aa  86.3  1e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_5693  two component LuxR family transcriptional regulator  36.67 
 
 
224 aa  86.7  1e-16  Burkholderia phymatum STM815  Bacteria  normal  normal  0.247452 
 
 
-
 
NC_012848  Rleg_5187  two component transcriptional regulator, LuxR family  38.84 
 
 
230 aa  86.7  1e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.209149 
 
 
-
 
NC_008554  Sfum_0943  two component LuxR family transcriptional regulator  37.5 
 
 
214 aa  86.7  1e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5502  two component response regulator  36.21 
 
 
212 aa  86.7  1e-16  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2406  response regulator receiver protein  40.78 
 
 
124 aa  85.9  2e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.88187 
 
 
-
 
NC_012850  Rleg_1546  response regulator receiver protein  39.5 
 
 
131 aa  85.9  2e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0280611  normal  0.028816 
 
 
-
 
NC_007778  RPB_0181  two component LuxR family transcriptional regulator  38.33 
 
 
210 aa  85.5  2e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3108  LuxR response regulator receiver  38.66 
 
 
202 aa  85.1  3e-16  Dechloromonas aromatica RCB  Bacteria  normal  0.786061  normal 
 
 
-
 
NC_010515  Bcenmc03_5088  response regulator receiver protein  34.62 
 
 
124 aa  84.7  4e-16  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3179  response regulator receiver protein  34.29 
 
 
132 aa  84.7  4e-16  Burkholderia cenocepacia AU 1054  Bacteria  hitchhiker  0.00699153  n/a   
 
 
-
 
NC_010501  PputW619_2318  response regulator receiver protein  47.79 
 
 
125 aa  84  6e-16  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2407  two component transcriptional regulator, LuxR family  36.67 
 
 
220 aa  84  7e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.958584 
 
 
-
 
NC_012858  Rleg_6901  response regulator receiver protein  39.02 
 
 
123 aa  83.6  8e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.279255  normal  0.546779 
 
 
-
 
NC_007492  Pfl01_2249  two component LuxR family transcriptional regulator  37.93 
 
 
204 aa  83.2  0.000000000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012853  Rleg_5743  two component transcriptional regulator, LuxR family  41.74 
 
 
212 aa  83.2  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5548  DNA-binding response regulator, LuxR family  36.67 
 
 
212 aa  82.8  0.000000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2455  response regulator receiver domain-containing protein  38.26 
 
 
124 aa  82.4  0.000000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2505  two component LuxR family transcriptional regulator  34.13 
 
 
210 aa  82.4  0.000000000000002  Burkholderia sp. 383  Bacteria  normal  0.382458  normal  0.897172 
 
 
-
 
NC_011004  Rpal_3839  two component transcriptional regulator, LuxR family  39.37 
 
 
210 aa  82  0.000000000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.287356  n/a   
 
 
-
 
NC_007298  Daro_3812  two component LuxR family transcriptional regulator  38.46 
 
 
208 aa  82  0.000000000000003  Dechloromonas aromatica RCB  Bacteria  normal  0.922787  normal  0.026414 
 
 
-
 
NC_008391  Bamb_5346  two component LuxR family transcriptional regulator  34.13 
 
 
210 aa  81.6  0.000000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.0593225  normal  0.752943 
 
 
-
 
NC_010515  Bcenmc03_3910  two component LuxR family transcriptional regulator  34.13 
 
 
210 aa  81.6  0.000000000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.855973 
 
 
-
 
NC_011368  Rleg2_5152  two component transcriptional regulator, LuxR family  37.61 
 
 
207 aa  82  0.000000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.341934  normal  0.483556 
 
 
-
 
NC_008543  Bcen2424_3610  two component LuxR family transcriptional regulator  34.13 
 
 
210 aa  81.6  0.000000000000003  Burkholderia cenocepacia HI2424  Bacteria  normal  0.603365  normal 
 
 
-
 
NC_009504  BOV_A0038  LuxR family DNA-binding response regulator  37.07 
 
 
212 aa  81.3  0.000000000000004  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0042  LuxR family DNA-binding response regulator  37.07 
 
 
212 aa  81.3  0.000000000000004  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3516  two component LuxR family transcriptional regulator  34.13 
 
 
210 aa  81.3  0.000000000000004  Burkholderia ambifaria MC40-6  Bacteria  normal  0.584359  normal  0.0331166 
 
 
-
 
NC_011004  Rpal_1519  two component transcriptional regulator, LuxR family  33.86 
 
 
228 aa  81.3  0.000000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.444774  n/a   
 
 
-
 
NC_014148  Plim_1719  response regulator receiver  36.72 
 
 
231 aa  81.3  0.000000000000004  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.760885  n/a   
 
 
-
 
NC_008009  Acid345_0844  response regulator receiver protein  38.84 
 
 
130 aa  81.3  0.000000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1267  response regulator receiver protein  33.06 
 
 
123 aa  80.9  0.000000000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1194  two component LuxR family transcriptional regulator  35 
 
 
210 aa  80.9  0.000000000000005  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00813352  normal  0.892025 
 
 
-
 
NC_008228  Patl_2096  two component LuxR family transcriptional regulator  33.33 
 
 
212 aa  81.3  0.000000000000005  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_09690  putative two-component response regulator  35.4 
 
 
214 aa  80.9  0.000000000000006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00000807943  normal 
 
 
-
 
NC_010681  Bphyt_2166  two component transcriptional regulator, LuxR family  34.71 
 
 
220 aa  80.5  0.000000000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3866  two component transcriptional regulator, LuxR family  37.93 
 
 
224 aa  80.5  0.000000000000007  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2996  LuxR response regulator receiver  33.33 
 
 
198 aa  80.1  0.000000000000009  Dechloromonas aromatica RCB  Bacteria  normal  0.437807  normal 
 
 
-
 
NC_009719  Plav_2356  response regulator receiver protein  36.43 
 
 
215 aa  80.1  0.000000000000009  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.504321 
 
 
-
 
NC_007347  Reut_A1301  LuxR response regulator receiver  35 
 
 
210 aa  79.7  0.00000000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.549132  n/a   
 
 
-
 
NC_014148  Plim_3049  response regulator receiver  32.31 
 
 
228 aa  79.3  0.00000000000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.651154  n/a   
 
 
-
 
NC_008009  Acid345_3713  two component LuxR family transcriptional regulator  41.51 
 
 
208 aa  79.7  0.00000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.222966  normal 
 
 
-
 
NC_010679  Bphyt_7267  two component transcriptional regulator, LuxR family  38.89 
 
 
217 aa  79.3  0.00000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2095  response regulator receiver protein  31.4 
 
 
216 aa  79.7  0.00000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2593  two component transcriptional regulator, LuxR family  35.71 
 
 
214 aa  78.6  0.00000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.382122  hitchhiker  0.00235574 
 
 
-
 
NC_007298  Daro_2491  LuxR response regulator receiver  36.09 
 
 
211 aa  79  0.00000000000002  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000456787  normal 
 
 
-
 
NC_012850  Rleg_1545  two component transcriptional regulator, LuxR family  32.76 
 
 
218 aa  79.3  0.00000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0982964  normal  0.0521608 
 
 
-
 
NC_008825  Mpe_A2130  two component LuxR family transcriptional regulator  33.08 
 
 
207 aa  79  0.00000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.281977  normal 
 
 
-
 
NC_007951  Bxe_A1539  two component LuxR family transcriptional regulator  35.71 
 
 
214 aa  79.3  0.00000000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.274992 
 
 
-
 
NC_010086  Bmul_5088  two component LuxR family transcriptional regulator  34.13 
 
 
241 aa  79  0.00000000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.685625 
 
 
-
 
NC_010623  Bphy_5502  response regulator receiver protein  32.81 
 
 
136 aa  79  0.00000000000002  Burkholderia phymatum STM815  Bacteria  normal  0.020979  normal 
 
 
-
 
NC_008554  Sfum_0583  response regulator receiver protein  38.14 
 
 
123 aa  78.2  0.00000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.765018 
 
 
-
 
NC_012858  Rleg_6853  two component transcriptional regulator, LuxR family  37.61 
 
 
223 aa  78.6  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1862  LuxR family DNA-binding response regulator  32.84 
 
 
212 aa  78.6  0.00000000000003  Burkholderia thailandensis E264  Bacteria  normal  0.340696  n/a   
 
 
-
 
NC_009719  Plav_2041  response regulator receiver protein  34.82 
 
 
214 aa  78.6  0.00000000000003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.212509  hitchhiker  0.00400016 
 
 
-
 
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