| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2317 |
|---|
| Symbol | |
|---|
| ID | 6111270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2593903 |
|---|
| End bp | 2594532 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641622112 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001749186 |
|---|
| Protein GI | 170721498 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA CCTGCATCTA CATGGTGGAC GATGATCACG ACCTGTGCGA GGCCGTAGTT
GGGCTTCTGC GTTCGGTTGA TCTGGCCGTG AAAACCTTCG CTTCGCCGAA TGAGTTCCTC
CAGTTTCCGC GTCCGGAGGT TCCTAGTTGT TTGATTCTCG ATGTGCGCCT CAAAGGCGCT
AGCGGCCTGG ACTTCCAAGC TCGTATGGAC GATTTGCGGG TGAACATTCC AGTAATCATG
ATGACTGCCT ACGGGGATAT CCCAATGAGC GTCAGGGCCA TGAAGGCCGG CGCCTTGGGC
TTTCTCACCA AACCATTTCG CGATCAGGAT CTACTCGATG CTGTAGTAGA GGCTCTTGAG
CATGATCGTC AACGCCGAGT GAGCGAGGAA GGCATCATCG AGTTGCGTGA GCGCCACAAC
CGCCTAAGCA CACGTGAGCA GGAGGTGATG GCCATGGCCA CGACTGGCCT GTTGAACAAG
CAAATTGCAG CCGAGCTAGG GATTAGCGAG GTCACGGTGA AGATTCATCG AGGCAGTGCG
ATGCGCAAGA TGAACGCCGG CTCGTTCGCC GAATTAGTGC GCATGGCTCA AGCGTTATCA
GTGCAATGGC AAGCACAAGG TCAAGCCTAG
|
|---|
| Protein sequence | MKNTCIYMVD DDHDLCEAVV GLLRSVDLAV KTFASPNEFL QFPRPEVPSC LILDVRLKGA
SGLDFQARMD DLRVNIPVIM MTAYGDIPMS VRAMKAGALG FLTKPFRDQD LLDAVVEALE
HDRQRRVSEE GIIELRERHN RLSTREQEVM AMATTGLLNK QIAAELGISE VTVKIHRGSA
MRKMNAGSFA ELVRMAQALS VQWQAQGQA
|
|---|
| |