Gene Rpal_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1519 
Symbol 
ID6409176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1600908 
End bp1601594 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content64% 
IMG OID642711413 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_001990528 
Protein GI192289923 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.444774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA AACCCGGCGG GTCACAGCAA TCGCTGATCT GCGTCGTCGA TGACGACGAA 
GACGTCCGCA ACTCGATCAG CAGCCTGCTG CGCTCGGTCG GCTATAGGGT GAAGACTTTC 
GCCGGACCGC AGGACTTTCT CGCATCCGAT GCCGTCGACG ACGCCTCCTG CCTGATTTTG 
GATATCCGGC TCGGCGAAGC GGATGGCCTG GAATTTCAGC AGGAACTCGT CGCCGCCGAT 
ACGCCGATTC CGATCATCCT GATCTCGGGT CACGGCGACA TTCCCATGAC GGTCCGGGCA 
ATGAAGGCCG GCGCCGTCAA CTTCCTTCCC AAACCTTTCG ACGAGGCCAC GCTACTCGCC 
GGAGTCCGCG AGGCCGTGTC CCGCGCGCGG CAGAAGCGGA GCGAGGCCGA GCGTGACCAT 
AGCCTCCGTA TGCACTATGA ATCGCTGACA TCGCGCGAAC GCGAGGTGAT GGGGCTGGTC 
ACGGCCGGCT TGATGAACAA GCAGATCGCC TGGCAGCTGT CGCTCAGCGA GATCACCGTC 
AAGATTCACC GCGGCAACAT GATGCGAAAG ATGCAGGCGA AGTCTCTTGC CGAGCTGGTC 
CGGATGGCCG ACGCGCTTGG CGTCCGGGCG GCGCCCGCCG CTCAGCTCAA CGGCCCTCGG 
CGCGAGCCGC CGACGTCGCA ACATTAG
 
Protein sequence
MSEKPGGSQQ SLICVVDDDE DVRNSISSLL RSVGYRVKTF AGPQDFLASD AVDDASCLIL 
DIRLGEADGL EFQQELVAAD TPIPIILISG HGDIPMTVRA MKAGAVNFLP KPFDEATLLA 
GVREAVSRAR QKRSEAERDH SLRMHYESLT SREREVMGLV TAGLMNKQIA WQLSLSEITV 
KIHRGNMMRK MQAKSLAELV RMADALGVRA APAAQLNGPR REPPTSQH