More than 300 homologs were found in PanDaTox collection
for query gene BRA0042 on replicon NC_004311
Organism: Brucella suis 1330



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004311  BRA0042  LuxR family DNA-binding response regulator  100 
 
 
212 aa  432  1e-120  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0038  LuxR family DNA-binding response regulator  100 
 
 
212 aa  432  1e-120  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5502  two component response regulator  58.29 
 
 
212 aa  243  9.999999999999999e-64  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3511  two component transcriptional regulator, LuxR family  58.08 
 
 
209 aa  241  7e-63  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00709  nodulation protein  56.35 
 
 
200 aa  234  7e-61  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  hitchhiker  0.00695869  n/a   
 
 
-
 
NC_011071  Smal_2139  two component transcriptional regulator, LuxR family  57.87 
 
 
213 aa  233  1.0000000000000001e-60  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5548  DNA-binding response regulator, LuxR family  56.57 
 
 
212 aa  232  4.0000000000000004e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5088  LuxR response regulator receiver  54.55 
 
 
212 aa  224  8e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1553  two component LuxR family transcriptional regulator  52.71 
 
 
212 aa  208  4e-53  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2407  two component transcriptional regulator, LuxR family  50.75 
 
 
220 aa  203  1e-51  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.958584 
 
 
-
 
NC_007492  Pfl01_2279  two component LuxR family transcriptional regulator  50 
 
 
212 aa  197  7e-50  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2459  two component LuxR family transcriptional regulator  49.75 
 
 
215 aa  197  1.0000000000000001e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_5693  two component LuxR family transcriptional regulator  47 
 
 
224 aa  195  4.0000000000000005e-49  Burkholderia phymatum STM815  Bacteria  normal  normal  0.247452 
 
 
-
 
NC_008825  Mpe_A2536  two component regulator  51.02 
 
 
204 aa  195  5.000000000000001e-49  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.378867 
 
 
-
 
NC_012853  Rleg_5743  two component transcriptional regulator, LuxR family  47.8 
 
 
212 aa  195  5.000000000000001e-49  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4618  two component LuxR family transcriptional regulator  49.51 
 
 
224 aa  194  9e-49  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2317  two component LuxR family transcriptional regulator  49.25 
 
 
209 aa  193  1e-48  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1268  two component LuxR family transcriptional regulator  48.24 
 
 
220 aa  191  1e-47  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3839  two component transcriptional regulator, LuxR family  47 
 
 
210 aa  189  2.9999999999999997e-47  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.287356  n/a   
 
 
-
 
NC_007951  Bxe_A2884  two component LuxR family transcriptional regulator  48.02 
 
 
229 aa  188  5e-47  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.538425 
 
 
-
 
NC_008009  Acid345_3729  two component LuxR family transcriptional regulator  47.45 
 
 
209 aa  188  5e-47  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2400  two component transcriptional regulator, LuxR family  45.6 
 
 
210 aa  188  5.999999999999999e-47  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0181  two component LuxR family transcriptional regulator  45.81 
 
 
210 aa  187  1e-46  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5090  two component LuxR family transcriptional regulator  46.53 
 
 
214 aa  187  1e-46  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.159727  normal 
 
 
-
 
NC_008543  Bcen2424_5186  two component LuxR family transcriptional regulator  46.53 
 
 
214 aa  187  1e-46  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.0233056 
 
 
-
 
NC_008061  Bcen_3181  two component LuxR family transcriptional regulator  46.53 
 
 
214 aa  187  1e-46  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.246114  n/a   
 
 
-
 
NC_011368  Rleg2_5456  two component transcriptional regulator, LuxR family  50 
 
 
230 aa  186  2e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.154935  hitchhiker  0.00976207 
 
 
-
 
NC_009485  BBta_7459  nodulation protein W, two-component transcriptional regulator  46.15 
 
 
219 aa  184  6e-46  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3713  two component LuxR family transcriptional regulator  50.55 
 
 
208 aa  183  1.0000000000000001e-45  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.222966  normal 
 
 
-
 
NC_012848  Rleg_5187  two component transcriptional regulator, LuxR family  49.04 
 
 
230 aa  184  1.0000000000000001e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.209149 
 
 
-
 
NC_009719  Plav_2380  response regulator receiver protein  48.97 
 
 
208 aa  183  2.0000000000000003e-45  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6495  two component LuxR family transcriptional regulator  46.7 
 
 
214 aa  182  5.0000000000000004e-45  Burkholderia ambifaria MC40-6  Bacteria  normal  0.653682  normal 
 
 
-
 
NC_008392  Bamb_5742  two component LuxR family transcriptional regulator  46.7 
 
 
219 aa  182  5.0000000000000004e-45  Burkholderia ambifaria AMMD  Bacteria  normal  0.505537  normal  0.963827 
 
 
-
 
NC_010679  Bphyt_7267  two component transcriptional regulator, LuxR family  48.9 
 
 
217 aa  181  6e-45  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4615  two component LuxR family transcriptional regulator  44.95 
 
 
218 aa  178  7e-44  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2682  two component transcriptional regulator, LuxR family  45.77 
 
 
222 aa  177  8e-44  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010681  Bphyt_1685  two component transcriptional regulator, LuxR family  46.88 
 
 
215 aa  177  9e-44  Burkholderia phytofirmans PsJN  Bacteria  normal  0.166103  normal  0.907447 
 
 
-
 
NC_008825  Mpe_A0811  two-component response regulator  46.73 
 
 
209 aa  177  1e-43  Methylibium petroleiphilum PM1  Bacteria  normal  0.184612  normal 
 
 
-
 
NC_011368  Rleg2_5152  two component transcriptional regulator, LuxR family  48.22 
 
 
207 aa  176  2e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.341934  normal  0.483556 
 
 
-
 
NC_009720  Xaut_3389  response regulator receiver protein  47 
 
 
211 aa  175  5e-43  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2871  response regulator receiver protein  43.72 
 
 
206 aa  174  7e-43  Pseudomonas putida F1  Bacteria  normal  0.313361  normal  0.346414 
 
 
-
 
NC_009719  Plav_2358  response regulator receiver protein  46.04 
 
 
233 aa  174  9.999999999999999e-43  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.119902  normal  0.5156 
 
 
-
 
NC_009621  Smed_5540  response regulator receiver protein  44.9 
 
 
226 aa  172  2.9999999999999996e-42  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0494649 
 
 
-
 
NC_008554  Sfum_0582  two component LuxR family transcriptional regulator  46.43 
 
 
206 aa  170  1e-41  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.812865 
 
 
-
 
NC_007404  Tbd_1743  two component LuxR family transcriptional regulator  46.73 
 
 
209 aa  170  2e-41  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.518394 
 
 
-
 
NC_012792  Vapar_6169  two component transcriptional regulator, LuxR family  47.12 
 
 
221 aa  168  5e-41  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5189  two component transcriptional regulator, LuxR family  44.67 
 
 
213 aa  168  5e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.814448  normal  0.223105 
 
 
-
 
NC_012858  Rleg_6853  two component transcriptional regulator, LuxR family  43.14 
 
 
223 aa  168  6e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1519  two component transcriptional regulator, LuxR family  42.44 
 
 
228 aa  167  1e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.444774  n/a   
 
 
-
 
NC_009719  Plav_2356  response regulator receiver protein  44.62 
 
 
215 aa  164  5.9999999999999996e-40  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.504321 
 
 
-
 
NC_007492  Pfl01_2249  two component LuxR family transcriptional regulator  42.86 
 
 
204 aa  165  5.9999999999999996e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0645  two component LuxR family transcriptional regulator  46.91 
 
 
240 aa  164  9e-40  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3108  LuxR response regulator receiver  42.35 
 
 
202 aa  164  9e-40  Dechloromonas aromatica RCB  Bacteria  normal  0.786061  normal 
 
 
-
 
NC_008554  Sfum_0943  two component LuxR family transcriptional regulator  44.5 
 
 
214 aa  163  1.0000000000000001e-39  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2166  two component transcriptional regulator, LuxR family  41.88 
 
 
220 aa  163  2.0000000000000002e-39  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_1946  two component transcriptional regulator, LuxR family  45.45 
 
 
220 aa  159  3e-38  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0317  LuxR family DNA-binding response regulator  43.46 
 
 
250 aa  159  3e-38  Burkholderia thailandensis E264  Bacteria  normal  0.0309445  n/a   
 
 
-
 
NC_011368  Rleg2_5458  two component transcriptional regulator, LuxR family  44.72 
 
 
213 aa  157  8e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0682828  normal  0.0164406 
 
 
-
 
NC_007974  Rmet_5318  two component LuxR family transcriptional regulator  43.96 
 
 
247 aa  156  2e-37  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00034283  normal  0.590249 
 
 
-
 
NC_008228  Patl_2096  two component LuxR family transcriptional regulator  39.3 
 
 
212 aa  156  2e-37  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2505  two component LuxR family transcriptional regulator  41.36 
 
 
210 aa  155  3e-37  Burkholderia sp. 383  Bacteria  normal  0.382458  normal  0.897172 
 
 
-
 
NC_008009  Acid345_2445  two component LuxR family transcriptional regulator  42.93 
 
 
226 aa  156  3e-37  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_5088  two component LuxR family transcriptional regulator  41.36 
 
 
241 aa  155  5.0000000000000005e-37  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.685625 
 
 
-
 
NC_008391  Bamb_5346  two component LuxR family transcriptional regulator  41.36 
 
 
210 aa  154  6e-37  Burkholderia ambifaria AMMD  Bacteria  normal  0.0593225  normal  0.752943 
 
 
-
 
NC_008543  Bcen2424_3610  two component LuxR family transcriptional regulator  41.36 
 
 
210 aa  154  8e-37  Burkholderia cenocepacia HI2424  Bacteria  normal  0.603365  normal 
 
 
-
 
NC_010515  Bcenmc03_3910  two component LuxR family transcriptional regulator  41.36 
 
 
210 aa  154  8e-37  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.855973 
 
 
-
 
NC_008340  Mlg_1832  two component LuxR family transcriptional regulator  42.5 
 
 
208 aa  154  9e-37  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3240  two component LuxR family transcriptional regulator  41.33 
 
 
207 aa  154  1e-36  Shewanella loihica PV-4  Bacteria  normal  normal  0.989265 
 
 
-
 
NC_012850  Rleg_1545  two component transcriptional regulator, LuxR family  40.72 
 
 
218 aa  154  1e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0982964  normal  0.0521608 
 
 
-
 
NC_010552  BamMC406_3516  two component LuxR family transcriptional regulator  40.31 
 
 
210 aa  152  2.9999999999999998e-36  Burkholderia ambifaria MC40-6  Bacteria  normal  0.584359  normal  0.0331166 
 
 
-
 
NC_011662  Tmz1t_3400  two component transcriptional regulator, LuxR family  41.67 
 
 
201 aa  152  2.9999999999999998e-36  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3812  two component LuxR family transcriptional regulator  42.71 
 
 
208 aa  151  5.9999999999999996e-36  Dechloromonas aromatica RCB  Bacteria  normal  0.922787  normal  0.026414 
 
 
-
 
NC_007484  Noc_1701  two component LuxR family transcriptional regulator  40.62 
 
 
201 aa  150  1e-35  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0166117  n/a   
 
 
-
 
NC_010086  Bmul_5185  two component LuxR family transcriptional regulator  43.01 
 
 
213 aa  150  2e-35  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2041  response regulator receiver protein  41.84 
 
 
214 aa  150  2e-35  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.212509  hitchhiker  0.00400016 
 
 
-
 
NC_010322  PputGB1_2371  two component LuxR family transcriptional regulator  41.33 
 
 
209 aa  149  2e-35  Pseudomonas putida GB-1  Bacteria  normal  0.820742  normal 
 
 
-
 
NC_011662  Tmz1t_3866  two component transcriptional regulator, LuxR family  43.59 
 
 
224 aa  149  3e-35  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5310  two component LuxR family transcriptional regulator  41.79 
 
 
228 aa  149  3e-35  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.659396 
 
 
-
 
NC_007347  Reut_A1301  LuxR response regulator receiver  39.42 
 
 
210 aa  148  6e-35  Ralstonia eutropha JMP134  Bacteria  normal  0.549132  n/a   
 
 
-
 
NC_012560  Avin_25360  Response regulator, LuxR family  42.71 
 
 
246 aa  147  8e-35  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1194  two component LuxR family transcriptional regulator  39.9 
 
 
210 aa  147  9e-35  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00813352  normal  0.892025 
 
 
-
 
NC_009507  Swit_5293  two component LuxR family transcriptional regulator  38.97 
 
 
203 aa  147  1.0000000000000001e-34  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0845  response regulator receiver protein  46.99 
 
 
183 aa  147  1.0000000000000001e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2223  response regulator receiver protein  40.82 
 
 
210 aa  145  4.0000000000000006e-34  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3551  LuxR family DNA-binding response regulator  40.82 
 
 
210 aa  145  4.0000000000000006e-34  Pseudomonas putida KT2440  Bacteria  normal  0.178316  normal 
 
 
-
 
NC_007484  Noc_1717  two component LuxR family transcriptional regulator  39.9 
 
 
205 aa  145  5e-34  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0231  two component LuxR family transcriptional regulator  41.05 
 
 
330 aa  145  5e-34  Pseudomonas putida W619  Bacteria  normal  0.523638  normal  0.456368 
 
 
-
 
NC_008254  Meso_2222  response regulator FixJ  43.52 
 
 
205 aa  144  1e-33  Chelativorans sp. BNC1  Bacteria  normal  0.0446915  n/a   
 
 
-
 
NC_002977  MCA2774  LuxR family DNA-binding response regulator  38.66 
 
 
216 aa  143  2e-33  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0211  two component LuxR family transcriptional regulator  41.26 
 
 
228 aa  143  2e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.664514  normal 
 
 
-
 
NC_007951  Bxe_A1539  two component LuxR family transcriptional regulator  36.45 
 
 
214 aa  143  2e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.274992 
 
 
-
 
NC_010681  Bphyt_2593  two component transcriptional regulator, LuxR family  36.45 
 
 
214 aa  142  3e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  0.382122  hitchhiker  0.00235574 
 
 
-
 
NC_009485  BBta_2788  response regulator FixJ  38.27 
 
 
205 aa  142  3e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0210669  normal  0.0766422 
 
 
-
 
NC_010622  Bphy_1472  two component LuxR family transcriptional regulator  36.45 
 
 
214 aa  142  3e-33  Burkholderia phymatum STM815  Bacteria  normal  normal  0.781461 
 
 
-
 
NC_007778  RPB_1363  response regulator FixJ  38.22 
 
 
205 aa  141  7e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.433868  normal 
 
 
-
 
NC_007794  Saro_1578  two component LuxR family transcriptional regulator  37.95 
 
 
207 aa  140  9.999999999999999e-33  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.661779  n/a   
 
 
-
 
NC_009379  Pnuc_0732  response regulator receiver protein  37.21 
 
 
215 aa  140  9.999999999999999e-33  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.298469  n/a   
 
 
-
 
NC_009439  Pmen_3815  response regulator receiver protein  39.06 
 
 
212 aa  140  9.999999999999999e-33  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4053  response regulator FixJ  39.27 
 
 
205 aa  140  9.999999999999999e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1597  response regulator transcription regulator protein  38.19 
 
 
210 aa  139  1.9999999999999998e-32  Ralstonia solanacearum GMI1000  Bacteria  normal  0.395881  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>