| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7459 |
|---|
| Symbol | |
|---|
| ID | 5152530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7834759 |
|---|
| End bp | 7835418 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640562113 |
|---|
| Product | nodulation protein W, two-component transcriptional regulator |
|---|
| Protein accession | YP_001243222 |
|---|
| Protein GI | 148258637 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCG GCGCTCCAGC CACCCGCACT CAGAAATCAA CCGTGGCGAT CGTGGATGAC
GATCCGTCCG TCCGGAAAGC CATTAGCAAT CTATGTGAAT CCGAAGGGTT CGACGTCGTG
GCGTTCTCCT CTACGGCCGA ATTCTTGCGC TGGTCGATTC CGGAGACACC CGTCTGCATG
GTCTTGGACG TCCGCATGCC GGGCGAAAAC GGGCTGGATT TTCAAGTCGA GCTAGCGAAG
TCTCACGCTG AAATTCCGAT CGTGTTTGTC ACGGCGCACG GTGACATTCC CATGTCTGTC
CGCGCCATGA AGGCTGGCGC CATCGAATTC CTGACAAAGC CGTTCAGGGA TCAGGACCTC
CTCGACGCCA TCAACGGCGG CTTGGCGAAA AGTCGTATGC GCCGTAACGC GCTCGAGATG
AATGCCGAAT TGGAAGCTCG ATACCAATCG CTGTCCAATC GCGAGCGAGA GGTGATGGAT
CTGATTACAA AGGGTCAACT CACGAAGCAG ATTGCGGCAA CACTCAACCT TAGCGAAATC
ACCGTTAAGG TCTGCCGCCG GCAAATCATG ACGAAGATGC AGGCGAATTC CATGCTCGAC
CTCGGACGCA TGTCAGAGAA ACTGGAAAGG ATGAGAAGCG GACCCGCGGA GCTCCGGTAG
|
|---|
| Protein sequence | MNLGAPATRT QKSTVAIVDD DPSVRKAISN LCESEGFDVV AFSSTAEFLR WSIPETPVCM
VLDVRMPGEN GLDFQVELAK SHAEIPIVFV TAHGDIPMSV RAMKAGAIEF LTKPFRDQDL
LDAINGGLAK SRMRRNALEM NAELEARYQS LSNREREVMD LITKGQLTKQ IAATLNLSEI
TVKVCRRQIM TKMQANSMLD LGRMSEKLER MRSGPAELR
|
|---|
| |