Gene Rleg2_5456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5456 
Symbol 
ID6978550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1100567 
End bp1101259 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID643394556 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002279374 
Protein GI209547456 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.154935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00976207 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAGTTG ACCAGCCGTT GCTGCGGAGA TCGGCGCCGT TATCATTGCA GGGCAGATAT 
GAAGAGGATC AGCCGCTCGT CATTATCGTC GATGACGACG CGTCGGTTCG CGAAGCGCTG
TCGGAGCTGA TCCTGTCGGC AGGTTTTCAG TCGGTCAGTT TTGCCTCGAC CCGCGAATTG
CTTGATGCCG ATATCTTGGA AAACCCCGGC TGCCTGATCC TCGATGTGCG AATGCCCGGC
GCAAGCGGCC TCCACTTGCA GAGCCATCTG GCCGAAAACG GCATTTCCAA GCCGATCATT
TTTCTGACCG GCCACGGCGA TATCCCGATG ACCGTTCAGG CGATGAAGGC GGGTGCTGTG
GATTTTCTTA CCAAGCCGGT GCGGGACCAG ACCCTGCTCG ACGCCATCAC TGCGGCCATT
GCGATGGACG CCGAACGACG GGCCGAAGCC GCAATCGCCA AACGCAATGT CAAACGCCTG
GAGACGCTGA CGCAGCGCGA GCGCGAGGTG CTGCACGAAG TGGCGCGCGG ACGCCTCAAC
AAACAGATCG CCTTCGATCT CGGCATCAGC GAAGTGACTG TTAAACTGCA TCGCAGCAAC
GTCATGCACA AGATGGAGGC CGCCTCGATC GGCGAACTGA TCCGGGCCTG GGAAACGCTG
CCTGCGCAGA TGCGCCAGGC CGGCTCGCGT TAA
 
Protein sequence
MRVDQPLLRR SAPLSLQGRY EEDQPLVIIV DDDASVREAL SELILSAGFQ SVSFASTREL 
LDADILENPG CLILDVRMPG ASGLHLQSHL AENGISKPII FLTGHGDIPM TVQAMKAGAV
DFLTKPVRDQ TLLDAITAAI AMDAERRAEA AIAKRNVKRL ETLTQREREV LHEVARGRLN
KQIAFDLGIS EVTVKLHRSN VMHKMEAASI GELIRAWETL PAQMRQAGSR