Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5456 |
Symbol | |
ID | 6978550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 1100567 |
End bp | 1101259 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643394556 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_002279374 |
Protein GI | 209547456 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.154935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00976207 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAGTTG ACCAGCCGTT GCTGCGGAGA TCGGCGCCGT TATCATTGCA GGGCAGATAT GAAGAGGATC AGCCGCTCGT CATTATCGTC GATGACGACG CGTCGGTTCG CGAAGCGCTG TCGGAGCTGA TCCTGTCGGC AGGTTTTCAG TCGGTCAGTT TTGCCTCGAC CCGCGAATTG CTTGATGCCG ATATCTTGGA AAACCCCGGC TGCCTGATCC TCGATGTGCG AATGCCCGGC GCAAGCGGCC TCCACTTGCA GAGCCATCTG GCCGAAAACG GCATTTCCAA GCCGATCATT TTTCTGACCG GCCACGGCGA TATCCCGATG ACCGTTCAGG CGATGAAGGC GGGTGCTGTG GATTTTCTTA CCAAGCCGGT GCGGGACCAG ACCCTGCTCG ACGCCATCAC TGCGGCCATT GCGATGGACG CCGAACGACG GGCCGAAGCC GCAATCGCCA AACGCAATGT CAAACGCCTG GAGACGCTGA CGCAGCGCGA GCGCGAGGTG CTGCACGAAG TGGCGCGCGG ACGCCTCAAC AAACAGATCG CCTTCGATCT CGGCATCAGC GAAGTGACTG TTAAACTGCA TCGCAGCAAC GTCATGCACA AGATGGAGGC CGCCTCGATC GGCGAACTGA TCCGGGCCTG GGAAACGCTG CCTGCGCAGA TGCGCCAGGC CGGCTCGCGT TAA
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Protein sequence | MRVDQPLLRR SAPLSLQGRY EEDQPLVIIV DDDASVREAL SELILSAGFQ SVSFASTREL LDADILENPG CLILDVRMPG ASGLHLQSHL AENGISKPII FLTGHGDIPM TVQAMKAGAV DFLTKPVRDQ TLLDAITAAI AMDAERRAEA AIAKRNVKRL ETLTQREREV LHEVARGRLN KQIAFDLGIS EVTVKLHRSN VMHKMEAASI GELIRAWETL PAQMRQAGSR
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