Gene Smed_5523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5523 
Symbol 
ID5319825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp488872 
End bp489240 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content57% 
IMG OID640777276 
Productresponse regulator receiver protein 
Protein accessionYP_001314208 
Protein GI150377613 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC AAAAGCCGCT CGTTTCAGTC GTGGATGATG ACGAGTCGGT CCGAGAAGCC 
CTCCCCGACC TGATCCGCAT ATTTGGCTTC GACGTCCGTG CGTTTTCGTC AGCTGATGAG
TTCCTTGCGT CCGAATGGTT GAAGGACACC GACTGCCTCG TTCTGGACGT CGCCATGCCT
GGCATGTCCG GCCCGGAATT GCAGGAAGAA CTTGCCCGGC GAGGCGAGAA GATTCCCATA
ATCTTCATCA CCGCGCATAA AGATGAGAGC GAGCGCATTC CGCTGCTTCA GAGCGGCGCT
GTAGACTGCC TCTTCAAACC CTTCAGCGAC GTTGCACTGC AAGACGCACT CGATCGAGCA
TTGCGCTAA
 
Protein sequence
MKTQKPLVSV VDDDESVREA LPDLIRIFGF DVRAFSSADE FLASEWLKDT DCLVLDVAMP 
GMSGPELQEE LARRGEKIPI IFITAHKDES ERIPLLQSGA VDCLFKPFSD VALQDALDRA
LR