Gene PP_5240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5240 
Symbol 
ID1042333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5977750 
End bp5978118 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content64% 
IMG OID637148639 
Productresponse regulator 
Protein accessionNP_747341 
Protein GI26991916 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAG GGGTGTGCAT CGTCGACGAC GATGCCTCGG TGCGCAAAAG CCTGGCCAAC 
CTGCTGCGCT CGGCGGGGTT CGAGACCTTG TCGTTTTCCG CCGGGCACGC ATTCCTGGCT
TCGCCACTGG CGGGCGAGGC GGGCTGTGTG TTGCTGGACC TGAAAATGCC GGGGATGAGC
GGGCTGGAGG TACAGCGTGA GCTGGCACAG CGGGGGTGGC GCTTGCCGGT GATCTGTATG
TCGGCACATT GGGACGATGG CTCGGTACGG GCAGCGATGG GCCTTGGGGC ACTGGCCTGC
CTGGGCAAGC CGTTTTCTGA AGAGGTGCTG CTGAAGGTGG TTGAAGAGGC TTTGGCTGGC
GGTCAGTGA
 
Protein sequence
MSRGVCIVDD DASVRKSLAN LLRSAGFETL SFSAGHAFLA SPLAGEAGCV LLDLKMPGMS 
GLEVQRELAQ RGWRLPVICM SAHWDDGSVR AAMGLGALAC LGKPFSEEVL LKVVEEALAG
GQ