| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4618 |
|---|
| Symbol | |
|---|
| ID | 6181391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1726818 |
|---|
| End bp | 1727492 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641684377 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001811288 |
|---|
| Protein GI | 172063637 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTG ATACGCAAGA CCCCGCCCAG CAATCGATCG TCTATGTCGT CGACGACGAC
GAGTCGATGC GAACGGCGGT CGACATGCTG CTCCGGTCGG TAGGGTTCCG CGCCGAAGCG
TTCGCATCGG CGCAGGAGTT TCTCGCCTTC GACAAACCCG ACGTGGCGAG TTGCCTGATT
CTCGACGTTC GCCTGAAAGG CCAGAGCGGG CTCGCGGTTC AGGAGCAGAT CGCGGCCGCC
GACCTGCATC TGCCGATCAT CTTCATGACG GCGTACGGCG ATATTGCGAT GTCGGTGAAG
GCGATGAAGG CCGGTGCGAT GGATTTTCTT CCGAAGCCAT TTCGGGAGCA GGACATGCTC
GATGCGGTCA CGACGGCACT CGAGCGCGAC GCGCGCTGGA GAAGCGAGCA TCGTTCGCTC
GTCGACCTGC GTGCGCGCTA TGCAACGCTG TCCGCGCGCG AGCGCGAGGT CATGGCATTC
GTGGCGAGCG GGCTGATGAA CAAGCAGATC GCGGCAGAAA TGAATCTGAG TGAAATCACC
GTGAAGATTC ACCGCGGACA GGCGATGAAG AAAATGGAGG CGCGCTCGTT GGCCGACTTC
GTGAAGAAGG CGGAGGCGCT GGGTGTCGAC CGGCCGGCGC AGGCGCCTGC GGCAGCCAGA
ATGCAGCGCA GCTAG
|
|---|
| Protein sequence | MNTDTQDPAQ QSIVYVVDDD ESMRTAVDML LRSVGFRAEA FASAQEFLAF DKPDVASCLI
LDVRLKGQSG LAVQEQIAAA DLHLPIIFMT AYGDIAMSVK AMKAGAMDFL PKPFREQDML
DAVTTALERD ARWRSEHRSL VDLRARYATL SAREREVMAF VASGLMNKQI AAEMNLSEIT
VKIHRGQAMK KMEARSLADF VKKAEALGVD RPAQAPAAAR MQRS
|
|---|
| |