Gene Plav_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2358 
Symbol 
ID5453925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2544892 
End bp2545593 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content57% 
IMG OID640877936 
Productresponse regulator receiver protein 
Protein accessionYP_001413627 
Protein GI154252803 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.119902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.5156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTTG ATCAGACGCA AAGGCGAAGT TCGGCGCCAT TTTCATCGGC ACCGGAGAAT 
GCGGAAAAAC AGCCAATCGT CATTATTGTC GATGACGATC CCACTGTCCG TGAAGCATTG
TCCGAGTTGA TCCTCTCGGC GGGCTTCCAA ATGGCCTGTT TTGCTTCGAC CCGCGAACTG
CTGGACGGTG ACGCGTTGGA CAGTCACGGT TGCCTGATTC TCGACGTCCG CATGCCAGGG
GCGAGCGGTC TCGATCTGCA GCATCATCTC GCGGAGAGCG GAAACACAAA GCCGATCATC
TTCTTGACGG GACACGCGGA TATTCCAATG ACCGTGCAGG CGATGAAGGC GGGTGCCGTT
GACTTCCTGA CCAAACCGGT GAGGGACCAG ACTCTGATCG ACGCGGTGAA CGCTGCCATT
ACCGTCGATG CTCAACGGAG AGCGGAATCT GCGGTCACGG AGCGCAATAT CGAACGTTAC
AGGACGTTGA CACCACGAGA GCATGAAGTC CTGTATGAAG TCGCGCGGGG ACGCGTCAAC
AAGCAGATCG CATTCGACCT GGGTATCAGT GAAGTCACCG TGAAGCTGCA TCGCGGCAAT
GTGATGCGCA AGATGGAGGC TGCTTCTATC GGTGAGTTGA TCCGGGCGTG GGAATCGCTG
CCCCCACAAT TGCGTGAAGC TGCTGCGCGA CCCGTTCTCT GA
 
Protein sequence
MRLDQTQRRS SAPFSSAPEN AEKQPIVIIV DDDPTVREAL SELILSAGFQ MACFASTREL 
LDGDALDSHG CLILDVRMPG ASGLDLQHHL AESGNTKPII FLTGHADIPM TVQAMKAGAV
DFLTKPVRDQ TLIDAVNAAI TVDAQRRAES AVTERNIERY RTLTPREHEV LYEVARGRVN
KQIAFDLGIS EVTVKLHRGN VMRKMEAASI GELIRAWESL PPQLREAAAR PVL