Gene Plim_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1719 
Symbol 
ID9138420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp2232994 
End bp2233689 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID 
Productresponse regulator receiver 
Protein accessionYP_003629748 
Protein GI296121970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.760885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAAT TCACTTCCTT AGCTCAGGAA CTGGCCACCA TGACCACAGA ACAGCCATTG 
CCACCGACGG TTTACGTGAT CGACGATGAC GCTGGATTTG CGGAATCTGC CAAGTTTCTG 
ATTGAGTCGA TCCATCGTCC GGTGGTGAAC TTCTCTTCGG CGGATGAATT TCTAGCGCAG 
TTCAACCCCA GGCATACCGG CTGCATCATC TGTGATGTGC GCATGCCGGG CATGAGCGGA 
CTCGAGCTTC AGGAAGTTCT GCGTGAACGC AATTGTCTGA TGCCGATCAT CATTATCTCC 
GCCTTTGGGG ATGTTCCGAT TGCCGTCCGG GCGATGAAAG CTGGTGCGAT CCATGTTCTC 
AAGAAACCAT TTGACGACAA CGATTTTCTG GAACTTATTC AGAAGGCCCT GGCGGAAGAT 
GCCAGACGAC GCGAAGAATT CCGGACACAG CAGGTGGTGC TGGATCGATA TGATCGCCTG 
ACTGACCGGG AACGGGAGGT TTTCGAAGAA GTCATTGAAG GTCTGTCGAG CAAAGAAATT 
GGCCAGCGGC TTTCAGTGAG CTTCAAAACC GTCGAGGCCC ATCGGGCGAA AATCATGAAG 
AAAATGGAAG CAGACAGTAT TCCGCAACTG CTGCGTATGT GGTTCACCAT TCAGCAATGC 
CGGCCGACGA AAACCATTCT CCCACCGCAG GGATAA
 
Protein sequence
MYQFTSLAQE LATMTTEQPL PPTVYVIDDD AGFAESAKFL IESIHRPVVN FSSADEFLAQ 
FNPRHTGCII CDVRMPGMSG LELQEVLRER NCLMPIIIIS AFGDVPIAVR AMKAGAIHVL 
KKPFDDNDFL ELIQKALAED ARRREEFRTQ QVVLDRYDRL TDREREVFEE VIEGLSSKEI 
GQRLSVSFKT VEAHRAKIMK KMEADSIPQL LRMWFTIQQC RPTKTILPPQ G