More than 300 homologs were found in PanDaTox collection
for query gene RSc1234 on replicon NC_003295
Organism: Ralstonia solanacearum GMI1000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003295  RSc1234  methyl-accepting chemotaxis transmembrane protein  100 
 
 
514 aa  1004    Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2191  methyl-accepting chemotaxis protein  65.49 
 
 
666 aa  592  1e-168  Burkholderia thailandensis E264  Bacteria  normal  0.918882  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0285  methyl-accepting chemotaxis protein  65.29 
 
 
563 aa  585  1e-166  Burkholderia pseudomallei 1106a  Bacteria  normal  0.877776  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1733  methyl-accepting chemotaxis protein I  65.1 
 
 
661 aa  585  1e-166  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0379  methyl-accepting chemotaxis protein  65.23 
 
 
542 aa  587  1e-166  Burkholderia pseudomallei 668  Bacteria  normal  0.366227  n/a   
 
 
-
 
NC_006349  BMAA1872  methyl-accepting chemotaxis protein  65.1 
 
 
542 aa  583  1.0000000000000001e-165  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0881  methyl-accepting chemotaxis protein  65.1 
 
 
661 aa  584  1.0000000000000001e-165  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4084  methyl-accepting chemotaxis sensory transducer  64.3 
 
 
511 aa  582  1.0000000000000001e-165  Burkholderia sp. 383  Bacteria  normal  0.51282  normal  0.262349 
 
 
-
 
NC_008835  BMA10229_1169  methyl-accepting chemotaxis protein  65.1 
 
 
542 aa  583  1.0000000000000001e-165  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A2146  methyl-accepting chemotaxis protein  65.1 
 
 
542 aa  583  1.0000000000000001e-165  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  51.64 
 
 
579 aa  459  9.999999999999999e-129  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_010002  Daci_5361  methyl-accepting chemotaxis sensory transducer  49.01 
 
 
508 aa  424  1e-117  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  48.21 
 
 
569 aa  365  1e-99  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  62.69 
 
 
580 aa  352  1e-95  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
554 aa  351  1e-95  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  61.99 
 
 
559 aa  348  1e-94  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  43.05 
 
 
553 aa  347  4e-94  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  64.65 
 
 
581 aa  346  7e-94  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  57.51 
 
 
578 aa  344  2e-93  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  64.5 
 
 
575 aa  342  1e-92  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  57.79 
 
 
580 aa  342  1e-92  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  59.49 
 
 
622 aa  340  4e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  58.87 
 
 
595 aa  340  5e-92  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  59.05 
 
 
508 aa  340  5e-92  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
572 aa  339  5.9999999999999996e-92  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  57.31 
 
 
583 aa  338  9.999999999999999e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  62.85 
 
 
559 aa  337  1.9999999999999998e-91  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  58.46 
 
 
523 aa  337  3.9999999999999995e-91  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
537 aa  335  7.999999999999999e-91  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  56.1 
 
 
554 aa  334  2e-90  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  63.28 
 
 
615 aa  333  4e-90  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  63.28 
 
 
615 aa  333  4e-90  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  55.79 
 
 
554 aa  333  5e-90  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  60.45 
 
 
591 aa  333  6e-90  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  60.45 
 
 
591 aa  332  8e-90  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  45.12 
 
 
513 aa  332  1e-89  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  55.43 
 
 
584 aa  332  1e-89  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  44.65 
 
 
513 aa  332  1e-89  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  51.24 
 
 
573 aa  332  1e-89  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  60.12 
 
 
586 aa  331  2e-89  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  43.44 
 
 
549 aa  331  2e-89  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  45.98 
 
 
592 aa  331  2e-89  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  49.17 
 
 
552 aa  329  8e-89  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  63.64 
 
 
577 aa  328  1.0000000000000001e-88  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  46.96 
 
 
567 aa  328  1.0000000000000001e-88  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  63.44 
 
 
516 aa  328  1.0000000000000001e-88  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  41.67 
 
 
543 aa  327  4.0000000000000003e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  56.19 
 
 
596 aa  327  4.0000000000000003e-88  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  60.68 
 
 
581 aa  326  6e-88  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  58.72 
 
 
579 aa  326  6e-88  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  58.81 
 
 
650 aa  326  8.000000000000001e-88  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  55.66 
 
 
565 aa  325  9e-88  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  46.73 
 
 
661 aa  325  1e-87  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  56.75 
 
 
587 aa  325  1e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.1 
 
 
515 aa  325  1e-87  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  61.54 
 
 
551 aa  325  2e-87  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  59.21 
 
 
522 aa  324  2e-87  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  59.21 
 
 
522 aa  324  2e-87  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  59.34 
 
 
659 aa  325  2e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  63.82 
 
 
614 aa  324  3e-87  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  58.81 
 
 
515 aa  323  3e-87  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  58.6 
 
 
653 aa  323  4e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  62.06 
 
 
525 aa  323  4e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  58.6 
 
 
653 aa  323  6e-87  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp0303  methyl-accepting chemotaxis transmembrane protein  48.34 
 
 
515 aa  322  9.999999999999999e-87  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0248188 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  57.36 
 
 
587 aa  321  1.9999999999999998e-86  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  57.96 
 
 
552 aa  321  1.9999999999999998e-86  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  57.83 
 
 
608 aa  320  3e-86  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  57.4 
 
 
570 aa  320  3e-86  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  60.73 
 
 
576 aa  320  3e-86  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  57.83 
 
 
608 aa  320  3e-86  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  61.81 
 
 
524 aa  320  3.9999999999999996e-86  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  61.46 
 
 
598 aa  320  3.9999999999999996e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  55.79 
 
 
585 aa  319  9e-86  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  57.31 
 
 
579 aa  319  9e-86  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  59.38 
 
 
608 aa  318  1e-85  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  57.24 
 
 
520 aa  318  1e-85  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  54.46 
 
 
566 aa  318  2e-85  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010515  Bcenmc03_5865  methyl-accepting chemotaxis sensory transducer  57.68 
 
 
539 aa  317  2e-85  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.439663  normal 
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  57.05 
 
 
520 aa  317  3e-85  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  57.91 
 
 
542 aa  317  3e-85  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  56.16 
 
 
553 aa  317  3e-85  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_008061  Bcen_3926  methyl-accepting chemotaxis sensory transducer  57.68 
 
 
539 aa  317  3e-85  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.279293  n/a   
 
 
-
 
NC_008543  Bcen2424_4440  methyl-accepting chemotaxis sensory transducer  57.68 
 
 
539 aa  317  3e-85  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  58.15 
 
 
551 aa  317  3e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  57.05 
 
 
520 aa  317  3e-85  Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  56.16 
 
 
553 aa  317  4e-85  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  56.16 
 
 
553 aa  317  4e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_007435  BURPS1710b_A2013  methyl-accepting chemotaxis protein  63.73 
 
 
634 aa  316  5e-85  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1955  methyl-accepting chemotaxis protein  62.66 
 
 
685 aa  317  5e-85  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
651 aa  316  5e-85  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  56.16 
 
 
553 aa  316  6e-85  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  55.86 
 
 
511 aa  316  6e-85  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0719  methyl-accepting chemotaxis protein  63.73 
 
 
616 aa  316  6e-85  Burkholderia pseudomallei 668  Bacteria  normal  0.152122  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0627  methyl-accepting chemotaxis protein  63.73 
 
 
616 aa  316  6e-85  Burkholderia pseudomallei 1106a  Bacteria  normal  0.202062  n/a   
 
 
-
 
NC_013421  Pecwa_3618  methyl-accepting chemotaxis sensory transducer  58.1 
 
 
551 aa  315  9e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  0.453306  n/a   
 
 
-
 
NC_013421  Pecwa_2019  methyl-accepting chemotaxis sensory transducer  49.16 
 
 
644 aa  315  9e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  0.858801  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  54.6 
 
 
562 aa  315  9.999999999999999e-85  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  55.09 
 
 
585 aa  315  9.999999999999999e-85  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007348  Reut_B5868  methyl-accepting chemotaxis sensory transducer  56.73 
 
 
541 aa  315  9.999999999999999e-85  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
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