119 homologs were found in PanDaTox collection
for query gene PCC7424_0115 on replicon NC_011729
Organism: Cyanothece sp. PCC 7424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011729  PCC7424_0115  putative transcriptional regulator, Crp/Fnr family  100 
 
 
225 aa  471  1e-132  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.2299 
 
 
-
 
NC_007413  Ava_1750  Crp/FNR family transcriptional regulator  60 
 
 
239 aa  280  2e-74  Anabaena variabilis ATCC 29413  Bacteria  normal  0.499959  normal 
 
 
-
 
NC_014248  Aazo_0140  putative Crp/Fnr family transcriptional regulator  60 
 
 
239 aa  279  2e-74  'Nostoc azollae' 0708  Bacteria  normal  0.0938698  n/a   
 
 
-
 
NC_008312  Tery_3616  CRP/FNR family transcriptional regulator  54.81 
 
 
256 aa  273  2.0000000000000002e-72  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0729234 
 
 
-
 
NC_007604  Synpcc7942_2356  Crp/FNR family transcriptional regulator  39.04 
 
 
208 aa  95.5  5e-19  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2491  Crp/FNR family transcriptional regulator  30.57 
 
 
393 aa  89  5e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.116073 
 
 
-
 
NC_007516  Syncc9605_1146  CRP/FNR family transcriptional regulator  35.66 
 
 
211 aa  88.6  6e-17  Synechococcus sp. CC9605  Bacteria  normal  0.242619  normal 
 
 
-
 
NC_011884  Cyan7425_0207  transcriptional regulator, Crp/Fnr family  38.41 
 
 
218 aa  77  0.0000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.163925 
 
 
-
 
NC_014248  Aazo_2484  putative Crp/Fnr family transcriptional regulator  29.02 
 
 
389 aa  74.3  0.000000000001  'Nostoc azollae' 0708  Bacteria  normal  0.399715  n/a   
 
 
-
 
NC_009972  Haur_1291  CRP/FNR family transcriptional regulator  33.33 
 
 
305 aa  71.6  0.000000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.06322  n/a   
 
 
-
 
NC_011729  PCC7424_3970  putative transcriptional regulator, Crp/Fnr family  28.77 
 
 
199 aa  70.5  0.00000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  27.31 
 
 
238 aa  67.8  0.0000000001  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  39.47 
 
 
225 aa  66.2  0.0000000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0353  putative transcriptional regulator, Crp/Fnr family  34.51 
 
 
200 aa  66.6  0.0000000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0346  putative transcriptional regulator, Crp/Fnr family  34.51 
 
 
200 aa  66.6  0.0000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  39.47 
 
 
225 aa  66.2  0.0000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008820  P9303_24561  CRP family global nitrogen regulatory protein  45.45 
 
 
222 aa  65.9  0.0000000005  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  39.47 
 
 
225 aa  65.5  0.0000000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  46.97 
 
 
210 aa  65.1  0.0000000008  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  36.84 
 
 
223 aa  64.7  0.000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  36.84 
 
 
223 aa  64.7  0.000000001  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_010320  Teth514_1376  CRP/FNR family transcriptional regulator  30 
 
 
228 aa  64.3  0.000000001  Thermoanaerobacter sp. X514  Bacteria  normal  0.271211  n/a   
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  38.16 
 
 
221 aa  63.9  0.000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  44.44 
 
 
243 aa  62.8  0.000000004  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  44.44 
 
 
243 aa  62.8  0.000000004  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0437  putative transcriptional regulator, Crp/Fnr family with PAS/PAC sensor  24.77 
 
 
405 aa  61.6  0.000000009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  38.16 
 
 
222 aa  61.2  0.00000001  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  40.62 
 
 
244 aa  60.1  0.00000003  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  35.53 
 
 
223 aa  60.1  0.00000003  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_007577  PMT9312_0248  Crp/FNR family transcriptional regulator  41.27 
 
 
244 aa  59.7  0.00000004  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  41.27 
 
 
244 aa  58.9  0.00000006  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
NC_009091  P9301_02691  CRP family global nitrogen regulatory protein  41.27 
 
 
244 aa  58.9  0.00000006  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2113  CRP/FNR family transcriptional regulator  29.17 
 
 
313 aa  58.5  0.00000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000556838  n/a   
 
 
-
 
NC_007513  Syncc9902_1998  CRP/FNR family transcriptional regulator  42.62 
 
 
207 aa  58.2  0.0000001  Synechococcus sp. CC9902  Bacteria  hitchhiker  0.00839318  n/a   
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  29.33 
 
 
234 aa  57.8  0.0000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_008820  P9303_11071  putative transcriptional regulator, Crp/Fnr family protein  25.4 
 
 
233 aa  57.4  0.0000002  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  25.83 
 
 
229 aa  56.6  0.0000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0463  Crp/FNR family transcriptional regulator  24.74 
 
 
197 aa  56.6  0.0000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.778777  normal  0.174596 
 
 
-
 
NC_007413  Ava_3366  Crp/FNR family transcriptional regulator  24.24 
 
 
208 aa  56.2  0.0000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.698764  normal  0.804601 
 
 
-
 
NC_007516  Syncc9605_1586  cAMP family transcriptional regulator  42.47 
 
 
182 aa  55.5  0.0000006  Synechococcus sp. CC9605  Bacteria  normal  0.406741  hitchhiker  0.00767311 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  24.46 
 
 
225 aa  55.5  0.0000007  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2448  transcriptional regulator, Crp/Fnr family  24.68 
 
 
238 aa  53.1  0.000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  24.19 
 
 
238 aa  53.5  0.000003  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_013739  Cwoe_3658  putative transcriptional regulator, Crp/Fnr family  32.63 
 
 
249 aa  52.8  0.000004  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.336394 
 
 
-
 
NC_008820  P9303_17661  regulatory proteins, Crp family protein  40.91 
 
 
260 aa  52  0.000008  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.941841 
 
 
-
 
NC_007516  Syncc9605_1574  CRP/FNR family transcriptional regulator  39.13 
 
 
191 aa  51.6  0.000009  Synechococcus sp. CC9605  Bacteria  normal  0.255141  normal  0.0532067 
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  36.11 
 
 
254 aa  51.2  0.00001  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_011146  Gbem_1802  transcriptional regulator, Crp/Fnr family  22.65 
 
 
238 aa  51.2  0.00001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  36.11 
 
 
254 aa  50.8  0.00001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_008312  Tery_4941  CRP/FNR family transcriptional regulator  54.55 
 
 
45 aa  50.4  0.00002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2869  putative transcriptional regulator, Crp/Fnr family  35.82 
 
 
211 aa  50.1  0.00002  Cyanothece sp. PCC 7425  Bacteria  decreased coverage  0.00060408  normal  0.537416 
 
 
-
 
NC_014248  Aazo_0990  putative Crp/Fnr family transcriptional regulator  29.41 
 
 
195 aa  50.8  0.00002  'Nostoc azollae' 0708  Bacteria  normal  0.596823  n/a   
 
 
-
 
NC_007335  PMN2A_0214  cAMP family transcriptional regulator  42.25 
 
 
198 aa  50.1  0.00003  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0814  CRP/FNR family transcriptional regulator  39.44 
 
 
195 aa  50.1  0.00003  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.0872325  n/a   
 
 
-
 
NC_008816  A9601_08701  Crp family regulatory proteins  39.44 
 
 
195 aa  49.7  0.00003  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_07751  Crp family regulatory proteins  39.44 
 
 
195 aa  50.1  0.00003  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_08461  Crp family regulatory proteins  42.25 
 
 
198 aa  50.1  0.00003  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.836651  hitchhiker  0.00426427 
 
 
-
 
NC_009091  P9301_08671  Crp family regulatory proteins  39.44 
 
 
195 aa  50.1  0.00003  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.0277995  n/a   
 
 
-
 
NC_007513  Syncc9902_2010  Crp family regulatory protein  41.1 
 
 
212 aa  48.5  0.00007  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1684  CRP/FNR family transcriptional regulator  33.68 
 
 
206 aa  48.5  0.00007  Synechococcus elongatus PCC 7942  Bacteria  normal  0.24693  normal  0.330754 
 
 
-
 
NC_007406  Nwi_0675  cyclic nucleotide-binding protein  36.76 
 
 
240 aa  48.1  0.00009  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.35129  normal  0.370797 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  25.71 
 
 
247 aa  48.1  0.0001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_2026  transcriptional activator Crp family  32.93 
 
 
241 aa  48.1  0.0001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  26.06 
 
 
261 aa  48.1  0.0001  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  26.13 
 
 
232 aa  48.1  0.0001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_009976  P9211_02711  global nitrogen regulatory protein  47.73 
 
 
244 aa  48.1  0.0001  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1987  fumarate/nitrate reduction transcriptional regulator  28.08 
 
 
239 aa  47.4  0.0002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  27.12 
 
 
254 aa  47.4  0.0002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  33.33 
 
 
254 aa  46.6  0.0003  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  23.62 
 
 
254 aa  46.2  0.0004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  37.5 
 
 
227 aa  46.2  0.0004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6152  Crp/FNR family transcriptional regulator  25.84 
 
 
256 aa  46.2  0.0004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2946  CRP/FNR family transcriptional regulator  28.26 
 
 
214 aa  45.8  0.0005  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.69422  normal 
 
 
-
 
NC_009636  Smed_1742  CRP/FNR family transcriptional regulator  31.25 
 
 
242 aa  45.8  0.0005  Sinorhizobium medicae WSM419  Bacteria  normal  0.275504  normal  0.265558 
 
 
-
 
NC_008312  Tery_1663  CRP/FNR family transcriptional regulator  26.11 
 
 
179 aa  45.8  0.0006  Trichodesmium erythraeum IMS101  Bacteria  normal  0.231367  normal 
 
 
-
 
NC_007604  Synpcc7942_2174  CRP/FNR family transcriptional regulator  35.53 
 
 
209 aa  45.1  0.0008  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.576133 
 
 
-
 
NC_010172  Mext_0772  cyclic nucleotide-binding  30.84 
 
 
254 aa  45.1  0.0008  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG2161  Crp/FNR family transcriptional regulator  40 
 
 
226 aa  44.7  0.001  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.776076  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  32.43 
 
 
225 aa  44.3  0.001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008148  Rxyl_1332  Crp/FNR family transcriptional regulator  39.22 
 
 
238 aa  44.7  0.001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.407818  n/a   
 
 
-
 
NC_008345  Sfri_2018  fumarate/nitrate reduction transcriptional regulator  22.66 
 
 
252 aa  44.7  0.001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.831368  n/a   
 
 
-
 
NC_008687  Pden_3468  CRP/FNR family transcriptional regulator  26.58 
 
 
236 aa  44.3  0.001  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009976  P9211_09541  Crp family regulatory protein  44.9 
 
 
197 aa  44.3  0.001  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.230149  hitchhiker  0.000196756 
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  32.84 
 
 
237 aa  44.7  0.001  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  22.52 
 
 
231 aa  44.3  0.001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  34.48 
 
 
236 aa  44.3  0.002  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  25.84 
 
 
236 aa  43.9  0.002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  23.62 
 
 
250 aa  43.9  0.002  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_008577  Shewana3_2115  fumarate/nitrate reduction transcriptional regulator  23.62 
 
 
250 aa  43.9  0.002  Shewanella sp. ANA-3  Bacteria  normal  0.508722  normal  0.0650668 
 
 
-
 
NC_009654  Mmwyl1_2233  CRP/FNR family transcriptional regulator  23.87 
 
 
253 aa  44.3  0.002  Marinomonas sp. MWYL1  Bacteria  normal  0.0375344  normal  0.791743 
 
 
-
 
NC_014151  Cfla_0719  transcriptional regulator, Crp/Fnr family  30.43 
 
 
257 aa  43.9  0.002  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000204419 
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  23.62 
 
 
250 aa  43.5  0.002  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_010510  Mrad2831_6158  cyclic nucleotide-binding protein  33.33 
 
 
251 aa  43.9  0.002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  23.4 
 
 
243 aa  43.5  0.002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  22.78 
 
 
233 aa  43.1  0.003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_008820  P9303_17701  regulatory proteins, Crp family protein  46.81 
 
 
198 aa  43.1  0.003  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.639467 
 
 
-
 
NC_009035  Sbal_4495  fumarate/nitrate reduction transcriptional regulator  23.2 
 
 
250 aa  43.5  0.003  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  22.78 
 
 
233 aa  43.1  0.003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2209  fumarate/nitrate reduction transcriptional regulator  23.2 
 
 
250 aa  43.5  0.003  Shewanella baltica OS155  Bacteria  hitchhiker  0.00613295  n/a   
 
 
-
 
NC_012850  Rleg_2360  transcriptional regulator, Crp/Fnr family  27.34 
 
 
240 aa  43.5  0.003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.948966  hitchhiker  0.00636029 
 
 
-
 
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