Gene Syncc9605_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1586 
Symbol 
ID3736883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1454629 
End bp1455177 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content55% 
IMG OID637776174 
ProductcAMP family transcriptional regulator 
Protein accessionYP_381890 
Protein GI78213111 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.406741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00767311 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAAGGC TTCAGACCGT TCTGCTGGAT CCTGCCGGTC GCGATCAGGC CACCGTTCTT 
GAGGTGTTGG AAGGTGTTTG CCGGGTGTAT TGCCCTTGTG AGGAAACCGA GGGAATGACT
TTGGCGTTTT TGCAGTCAGG CGACAGGCTT CGCACCGATC GCATGTGCAG TGACGGGGCT
TGTGTCGAGG CACTTACGGC CCTGAAGTTT CGTCGTGACT CCGTCTCCGC GGACGAATTC
GGAATCGACG CAGTCAATGA GTGGACCTTG CAGCTCCTAA GAGTCCGTCA TCTGGGTCAG
GCGGAACAGC GGCTTCACGC TCTTCTGGCG CTCTTGGTTA ACCGGCTTGG ACTTCGTTGC
AGCGATGCTT ATCAGCTTCC CTTCCGTCTA ACTCATGATC GTTTTGGTGA GTTAATCGGT
GCTACCCGGG TGACCACAAC CCGCCTTCTA TCGAAATGGC GTCAAGCCGA TATGATCGCC
ATGTCGTCTG GTGATGTCTC CATGCGCATT GCACCTGACC TCATTAATTC TTCACCACTC
CAATTTTGA
 
Protein sequence
MPRLQTVLLD PAGRDQATVL EVLEGVCRVY CPCEETEGMT LAFLQSGDRL RTDRMCSDGA 
CVEALTALKF RRDSVSADEF GIDAVNEWTL QLLRVRHLGQ AEQRLHALLA LLVNRLGLRC
SDAYQLPFRL THDRFGELIG ATRVTTTRLL SKWRQADMIA MSSGDVSMRI APDLINSSPL
QF