Gene Syncc9902_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2010 
Symbol 
ID3743732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1914093 
End bp1914731 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content54% 
IMG OID637772207 
ProductCrp family regulatory protein 
Protein accessionYP_378011 
Protein GI78185577 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTACTCTT GCAACCAATT CTCAATCGCA ATAGTTGTGA CGGCTTCTGC CTACCGTTTT 
TTGCCCGATG ATTCGGTTGC TCCGATGTCG ATGCCTCGCC AGCAGACTGT GTTGCTGGAT
CCGGCTGGTC GTGAGCAGGC CACAGTTCTT GAAGTGATGG AAGGGGTTTG TCGTGTGTAC
TGCCCATGCG AGGAAACCGA AGGGATGACC CTGGCATTTC TGCAATCCGG GGATCGTCTA
CGAACGGATC GCCTCTGTAG TGATGGTGCT TGCGTCGAAG CCTTAACCGC TCTGAAGTTT
CGGCGAGATG CCGTGAGTGC CGACGAGCTG GGCATGGATG CCGTCAACGA ATGGACATTG
CAGCTATTGC GTGTTCGCCA CCTAGGCCAG GCTGAGCAGC GGTTGCATGC GTTGTTGGTT
CTCTTAGTGA ATCGCTTGGG GATGCGGCGA AGTGATTGTT TTCAATTGCC CTTTCGTTTG
ACCCACGAAC GCTTTGGTGA GCTCATCGGT GCCACTCGTG TAACAACGAC TCGATTGCTC
TCCAAATGGC GTCAGTCTGA TCTGGTCGAA ATGTCGTCGA TCGATCTCAC AACCAGGCTT
TCGCCAGCCT TAGTTGAATC ATCCCCACTG ACCTTTTGA
 
Protein sequence
MYSCNQFSIA IVVTASAYRF LPDDSVAPMS MPRQQTVLLD PAGREQATVL EVMEGVCRVY 
CPCEETEGMT LAFLQSGDRL RTDRLCSDGA CVEALTALKF RRDAVSADEL GMDAVNEWTL
QLLRVRHLGQ AEQRLHALLV LLVNRLGMRR SDCFQLPFRL THERFGELIG ATRVTTTRLL
SKWRQSDLVE MSSIDLTTRL SPALVESSPL TF