Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_08461 |
Symbol | |
ID | 4780869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 776673 |
End bp | 777269 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640084121 |
Product | Crp family regulatory proteins |
Protein accession | YP_001014669 |
Protein GI | 124025553 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.836651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00426427 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCTTTA GAAGCTACGC AGAAACTCCT TCATCAGCTG TTCGAATGGC AACCGGGCAA TCCGTGCTGA TAGATCCCTC CTCAAGAAGA GGAGATACTT GCTTAGAGGT TTTAGAGGGC GTAGCACGTG TTTATTGCCC GTGTGAAGAA ACAGAGGGTA TGACATTGGC TTTCTTGCAG TCTGGCGATC AATTAAGAAC GGACCGGCTT TGCAGTGAAG GTGTATGCGT AGAAGCTTTA ACCCCTCTTT GTTTCGTAAG TGATGCTGAA ACGTCAGTTG AATCAGGAGG GTTCGACGCT GTCAACGAGT GGACTCTTCA GCTACTTAGA ATTAGACACT TAGGTAATGC TGAACAAAGA CTTCAAGCTT TATTTGCTTT ATTAGTTAAC CGACTTGGAA GAAGATGCGG TGATTGGTGC CAATTACCAT TCAGGCTTAC TCATGAAAGA ATTGGTGAGT TAATTGGATC AACAAGGGTT ACTTCTACTC GTTTAATTTC AAGACTGAGA ACAGCCGATT TACTAAGAGC TCCATCAGGT GATCCTACTC TAAGTCTTTC TCCGGACTTC ATTGAGTCAT CACCATTAAC CGCGTAA
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Protein sequence | MSFRSYAETP SSAVRMATGQ SVLIDPSSRR GDTCLEVLEG VARVYCPCEE TEGMTLAFLQ SGDQLRTDRL CSEGVCVEAL TPLCFVSDAE TSVESGGFDA VNEWTLQLLR IRHLGNAEQR LQALFALLVN RLGRRCGDWC QLPFRLTHER IGELIGSTRV TSTRLISRLR TADLLRAPSG DPTLSLSPDF IESSPLTA
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