More than 300 homologs were found in PanDaTox collection
for query gene Lcho_1538 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_1538  methyl-accepting chemotaxis sensory transducer  100 
 
 
413 aa  827    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0288765 
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
678 aa  185  1.0000000000000001e-45  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_007908  Rfer_2342  methyl-accepting chemotaxis sensory transducer  32.45 
 
 
508 aa  172  6.999999999999999e-42  Rhodoferax ferrireducens T118  Bacteria  normal  0.10605  n/a   
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
561 aa  164  3e-39  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  32.99 
 
 
594 aa  161  2e-38  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  33.74 
 
 
552 aa  158  1e-37  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
557 aa  159  1e-37  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
527 aa  159  1e-37  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  35.2 
 
 
561 aa  156  5.0000000000000005e-37  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  33.24 
 
 
587 aa  156  7e-37  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  33.02 
 
 
542 aa  155  2e-36  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_5591  methyl-accepting chemotaxis sensory transducer  35.88 
 
 
519 aa  155  2e-36  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  34.37 
 
 
523 aa  154  2.9999999999999998e-36  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  33.63 
 
 
508 aa  154  2.9999999999999998e-36  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
567 aa  154  4e-36  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
653 aa  154  4e-36  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
653 aa  153  4e-36  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
550 aa  153  5e-36  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
585 aa  152  8.999999999999999e-36  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  35.38 
 
 
537 aa  152  8.999999999999999e-36  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_013421  Pecwa_3571  methyl-accepting chemotaxis sensory transducer  32.38 
 
 
528 aa  152  8.999999999999999e-36  Pectobacterium wasabiae WPP163  Bacteria  normal  0.595797  n/a   
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  31.56 
 
 
572 aa  152  1e-35  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  33.55 
 
 
632 aa  152  1e-35  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  32.99 
 
 
630 aa  152  1e-35  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
578 aa  151  2e-35  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
584 aa  151  2e-35  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  32.45 
 
 
557 aa  151  2e-35  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
628 aa  151  2e-35  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
583 aa  151  2e-35  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  35.57 
 
 
555 aa  151  2e-35  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1888  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
487 aa  151  2e-35  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
659 aa  151  2e-35  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2065  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
554 aa  151  2e-35  Acidovorax sp. JS42  Bacteria  normal  0.460232  normal  0.464376 
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  35.24 
 
 
550 aa  151  2e-35  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2474  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
552 aa  150  3e-35  Dickeya dadantii Ech703  Bacteria  normal  0.356267  n/a   
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  34.77 
 
 
394 aa  151  3e-35  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  34.74 
 
 
589 aa  151  3e-35  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0394  methyl-accepting chemotaxis sensory transducer  30.61 
 
 
530 aa  150  3e-35  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  35.84 
 
 
642 aa  150  3e-35  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_012912  Dd1591_2327  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
655 aa  150  4e-35  Dickeya zeae Ech1591  Bacteria  normal  0.716134  n/a   
 
 
-
 
NC_011899  Hore_22560  methyl-accepting chemotaxis sensory transducer  32.93 
 
 
659 aa  150  5e-35  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0489  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
698 aa  150  6e-35  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.000832175  normal 
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
651 aa  149  7e-35  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  33.56 
 
 
559 aa  149  7e-35  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  35.57 
 
 
553 aa  149  7e-35  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  33.8 
 
 
532 aa  149  7e-35  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
580 aa  149  7e-35  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0112  putative methyl-accepting chemotaxis protein  35.43 
 
 
605 aa  148  1.0000000000000001e-34  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0071  methyl-accepting chemotaxis sensory transducer  33.03 
 
 
630 aa  149  1.0000000000000001e-34  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0176  methyl-accepting chemotaxis sensory transducer  35.54 
 
 
427 aa  149  1.0000000000000001e-34  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.8922  n/a   
 
 
-
 
NC_009076  BURPS1106A_3975  methyl-accepting chemotaxis protein  35.43 
 
 
601 aa  148  1.0000000000000001e-34  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3894  methyl-accepting chemotaxis protein  35.43 
 
 
601 aa  148  1.0000000000000001e-34  Burkholderia pseudomallei 668  Bacteria  normal  0.0518753  n/a   
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
589 aa  149  1.0000000000000001e-34  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_006348  BMA2894  methyl-accepting chemotaxis protein, putative  35.43 
 
 
605 aa  148  2.0000000000000003e-34  Burkholderia mallei ATCC 23344  Bacteria  normal  0.955347  n/a   
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  32.92 
 
 
652 aa  148  2.0000000000000003e-34  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3600  methyl-accepting chemotaxis sensory transducer  32.87 
 
 
510 aa  148  2.0000000000000003e-34  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2119  methyl-accepting chemotaxis sensory transducer  31.07 
 
 
549 aa  148  2.0000000000000003e-34  Enterobacter sp. 638  Bacteria  normal  normal  0.164628 
 
 
-
 
NC_010524  Lcho_4044  methyl-accepting chemotaxis sensory transducer  35.69 
 
 
644 aa  148  2.0000000000000003e-34  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000000893288 
 
 
-
 
NC_008785  BMASAVP1_A3471  putative methyl-accepting chemotaxis protein  35.43 
 
 
605 aa  148  2.0000000000000003e-34  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0395  methyl-accepting chemotaxis sensory transducer  33.03 
 
 
556 aa  147  3e-34  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5868  methyl-accepting chemotaxis sensory transducer  35.39 
 
 
541 aa  147  3e-34  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
520 aa  147  3e-34  Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_012917  PC1_3412  methyl-accepting chemotaxis sensory transducer  32.47 
 
 
528 aa  147  4.0000000000000006e-34  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0936318  n/a   
 
 
-
 
NC_008752  Aave_1100  methyl-accepting chemotaxis sensory transducer  35.83 
 
 
611 aa  147  4.0000000000000006e-34  Acidovorax citrulli AAC00-1  Bacteria  normal  0.127748  normal 
 
 
-
 
NC_010465  YPK_0034  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
649 aa  147  4.0000000000000006e-34  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.38678  n/a   
 
 
-
 
NC_009708  YpsIP31758_4122  methyl-accepting chemotaxis protein  31.95 
 
 
649 aa  147  4.0000000000000006e-34  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0496  methyl-accepting chemotaxis sensory transducer  30.56 
 
 
530 aa  147  5e-34  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.97 
 
 
617 aa  146  6e-34  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
NC_013421  Pecwa_2537  methyl-accepting chemotaxis sensory transducer  32.57 
 
 
508 aa  146  7.0000000000000006e-34  Pectobacterium wasabiae WPP163  Bacteria  normal  0.616273  n/a   
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
520 aa  146  8.000000000000001e-34  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_012912  Dd1591_1602  methyl-accepting chemotaxis sensory transducer  33.78 
 
 
554 aa  146  8.000000000000001e-34  Dickeya zeae Ech1591  Bacteria  normal  0.33331  n/a   
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.24 
 
 
556 aa  146  8.000000000000001e-34  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3767  methyl-accepting chemotaxis sensory transducer  32.93 
 
 
544 aa  145  9e-34  Delftia acidovorans SPH-1  Bacteria  normal  0.155197  normal  0.170651 
 
 
-
 
NC_009832  Spro_1415  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
546 aa  145  1e-33  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
511 aa  145  1e-33  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3774  methyl-accepting chemotaxis protein  32.69 
 
 
649 aa  145  1e-33  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  34.8 
 
 
549 aa  145  1e-33  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_012917  PC1_3443  methyl-accepting chemotaxis sensory transducer  32.76 
 
 
511 aa  145  1e-33  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.330959  n/a   
 
 
-
 
NC_011365  Gdia_0590  methyl-accepting chemotaxis sensory transducer  33.45 
 
 
627 aa  145  2e-33  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.727839  hitchhiker  0.0000148535 
 
 
-
 
NC_007651  BTH_I3209  methyl-accepting chemotaxis protein, putative  33.44 
 
 
601 aa  145  2e-33  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  30.28 
 
 
567 aa  144  2e-33  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  33.33 
 
 
695 aa  144  2e-33  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  33.57 
 
 
796 aa  144  3e-33  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_012917  PC1_4072  methyl-accepting chemotaxis sensory transducer  33.22 
 
 
540 aa  144  3e-33  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  35.59 
 
 
471 aa  144  3e-33  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_010676  Bphyt_6422  methyl-accepting chemotaxis sensory transducer  33.45 
 
 
514 aa  144  4e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756011  normal 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
554 aa  144  4e-33  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  30.1 
 
 
622 aa  144  4e-33  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2486  methyl-accepting chemotaxis sensory transducer  31.9 
 
 
504 aa  143  4e-33  Acidovorax citrulli AAC00-1  Bacteria  normal  0.961139  normal  0.110025 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  32.31 
 
 
544 aa  143  5e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  27.44 
 
 
661 aa  143  5e-33  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3862  methyl-accepting chemotaxis sensory transducer  33.03 
 
 
555 aa  143  6e-33  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  32.13 
 
 
589 aa  143  6e-33  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  31.19 
 
 
470 aa  143  6e-33  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_012912  Dd1591_0055  methyl-accepting chemotaxis sensory transducer  30 
 
 
628 aa  142  7e-33  Dickeya zeae Ech1591  Bacteria  normal  0.608397  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  34.41 
 
 
579 aa  142  8e-33  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_011369  Rleg2_0185  methyl-accepting chemotaxis sensory transducer  31.91 
 
 
669 aa  142  9e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2086  methyl-accepting chemotaxis sensory transducer  32.62 
 
 
653 aa  142  9e-33  Dickeya zeae Ech1591  Bacteria  normal  0.0240769  n/a   
 
 
-
 
NC_007947  Mfla_1570  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
517 aa  142  9e-33  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000360574  hitchhiker  0.0000341158 
 
 
-
 
NC_007794  Saro_2821  methyl-accepting chemotaxis sensory transducer  33.22 
 
 
687 aa  142  9.999999999999999e-33  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.950861  n/a   
 
 
-
 
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