More than 300 homologs were found in PanDaTox collection
for query gene GYMC61_3118 on replicon NC_013411
Organism: Geobacillus sp. Y412MC61



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013411  GYMC61_3118  transcriptional regulator, LuxR family  100 
 
 
391 aa  801    Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_0749  transcriptional regulator, LuxR family  45.78 
 
 
500 aa  239  9e-62  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0139  GAF modulated transcriptional regulator, LuxR family  31.21 
 
 
506 aa  112  1.0000000000000001e-23  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  45.33 
 
 
211 aa  65.9  0.000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  50 
 
 
207 aa  65.5  0.000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0105  two component LuxR family transcriptional regulator  51.52 
 
 
219 aa  65.1  0.000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0920509 
 
 
-
 
NC_013093  Amir_2811  two component transcriptional regulator, LuxR family  47.3 
 
 
217 aa  65.1  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.206772  n/a   
 
 
-
 
NC_009511  Swit_4359  regulatory protein, LuxR  33.82 
 
 
301 aa  64.3  0.000000003  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_2996  two component LuxR family transcriptional regulator  37.5 
 
 
595 aa  63.9  0.000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.896317  n/a   
 
 
-
 
NC_013947  Snas_4871  two component transcriptional regulator, LuxR family  47.3 
 
 
222 aa  63.2  0.000000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.134443  normal  0.31614 
 
 
-
 
NC_003909  BCE_3291  response regulator receiver domain-containing protein  49.25 
 
 
592 aa  62.4  0.00000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3228  Two-component protein Kinase  49.25 
 
 
595 aa  62.4  0.00000001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2026  Two-component protein Kinase  49.25 
 
 
595 aa  62.4  0.00000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4163  two component transcriptional regulator, LuxR family  51.61 
 
 
208 aa  62.8  0.00000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.296115  normal  0.698078 
 
 
-
 
NC_008699  Noca_4382  regulatory protein, LuxR  45.57 
 
 
1006 aa  62.8  0.00000001  Nocardioides sp. JS614  Bacteria  normal  0.172901  n/a   
 
 
-
 
NC_012850  Rleg_0548  transcriptional regulator, LuxR family  50.77 
 
 
244 aa  61.6  0.00000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.216848  normal 
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  34.75 
 
 
208 aa  61.6  0.00000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  41.43 
 
 
228 aa  61.6  0.00000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  34.23 
 
 
216 aa  61.6  0.00000002  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0440  regulatory protein LuxR  53.23 
 
 
246 aa  62  0.00000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0539143 
 
 
-
 
NC_009953  Sare_3511  two component LuxR family transcriptional regulator  52.46 
 
 
221 aa  61.2  0.00000003  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0444635 
 
 
-
 
NC_007954  Sden_3055  response regulator receiver  30.67 
 
 
219 aa  61.2  0.00000003  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0918  transcriptional regulator LuxR family  50.77 
 
 
230 aa  61.2  0.00000003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.71 
 
 
230 aa  61.2  0.00000003  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013205  Aaci_1854  transcriptional regulator, LuxR family  45.21 
 
 
75 aa  61.2  0.00000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3279  response regulator receiver  52.46 
 
 
221 aa  61.2  0.00000003  Salinispora tropica CNB-440  Bacteria  normal  0.97215  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  46.77 
 
 
219 aa  60.8  0.00000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  41.18 
 
 
228 aa  60.8  0.00000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  40.54 
 
 
217 aa  60.5  0.00000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  47.54 
 
 
220 aa  60.5  0.00000005  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  41.89 
 
 
225 aa  60.1  0.00000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  47.54 
 
 
219 aa  60.5  0.00000006  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013525  Tter_0530  transcriptional regulator, LuxR family  43.84 
 
 
217 aa  60.1  0.00000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  43.08 
 
 
208 aa  60.1  0.00000006  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  49.18 
 
 
211 aa  60.5  0.00000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  42.86 
 
 
212 aa  60.1  0.00000006  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_011369  Rleg2_0505  transcriptional regulator, LuxR family  49.23 
 
 
244 aa  60.1  0.00000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3086  LuxR family transcriptional regulator  43.55 
 
 
226 aa  59.7  0.00000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  44.44 
 
 
209 aa  59.7  0.00000009  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_002967  TDE0149  DNA-binding response regulator  41.76 
 
 
201 aa  59.7  0.0000001  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2440  two component transcriptional regulator, LuxR family  44.62 
 
 
220 aa  59.3  0.0000001  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000119534  normal  0.0380024 
 
 
-
 
NC_013159  Svir_02200  two component transcriptional regulator, LuxR family  51.67 
 
 
208 aa  58.9  0.0000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3072  two component LuxR family transcriptional regulator  39.24 
 
 
209 aa  59.3  0.0000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.875677  normal 
 
 
-
 
NC_009636  Smed_2601  regulatory protein LuxR  50 
 
 
247 aa  59.3  0.0000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38740  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.82 
 
 
250 aa  59.3  0.0000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2414  two component transcriptional regulator, LuxR family  50.79 
 
 
215 aa  58.9  0.0000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  47.3 
 
 
220 aa  59.3  0.0000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3087  transcriptional regulator, LuxR family  40.51 
 
 
241 aa  59.3  0.0000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4039  two component LuxR family transcriptional regulator  50.82 
 
 
250 aa  59.3  0.0000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.512873  n/a   
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  46.88 
 
 
211 aa  58.5  0.0000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0565  two component transcriptional regulator, LuxR family  38.18 
 
 
213 aa  58.5  0.0000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0164  two component transcriptional regulator, LuxR family  44.44 
 
 
234 aa  58.2  0.0000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0441129 
 
 
-
 
NC_011369  Rleg2_2818  transcriptional regulator, LuxR family  40.51 
 
 
241 aa  58.9  0.0000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0185947 
 
 
-
 
NC_013552  DhcVS_1132  DNA-binding response regulator, LuxR family  40.85 
 
 
225 aa  58.2  0.0000002  Dehalococcoides sp. VS  Bacteria  normal  0.893152  n/a   
 
 
-
 
NC_009767  Rcas_4428  two component LuxR family transcriptional regulator  42.47 
 
 
231 aa  58.2  0.0000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  43.75 
 
 
206 aa  58.5  0.0000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_009565  TBFG_10197  LuxR family two component transcriptional regulator  46.88 
 
 
232 aa  58.2  0.0000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  43.21 
 
 
217 aa  58.2  0.0000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  44.26 
 
 
219 aa  57.8  0.0000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_012850  Rleg_0318  transcriptional regulator, LuxR family  31.43 
 
 
234 aa  57.8  0.0000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0287  transcriptional regulator, LuxR family  31.07 
 
 
234 aa  57.8  0.0000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0323  transcriptional regulator, LuxR family  52.46 
 
 
243 aa  57.8  0.0000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0020  two component transcriptional regulator, LuxR family  50.82 
 
 
229 aa  58.2  0.0000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2409  LuxR family transcriptional regulator  47.54 
 
 
272 aa  57.8  0.0000003  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2575  ATP-dependent transcriptional regulator, MalT-like, LuxR family  46.15 
 
 
917 aa  57.8  0.0000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_1162  two component LuxR family transcriptional regulator  40.85 
 
 
225 aa  58.2  0.0000003  Dehalococcoides sp. BAV1  Bacteria  normal  0.130665  n/a   
 
 
-
 
NC_009997  Sbal195_1319  two component LuxR family transcriptional regulator  42.68 
 
 
216 aa  57.4  0.0000004  Shewanella baltica OS195  Bacteria  normal  0.0542522  decreased coverage  0.000972679 
 
 
-
 
NC_013595  Sros_0091  response regulator receiver protein  44.07 
 
 
204 aa  57.4  0.0000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.520551  normal 
 
 
-
 
NC_007348  Reut_B3606  LuxR transcriptional regulator  46.15 
 
 
947 aa  57.8  0.0000004  Ralstonia eutropha JMP134  Bacteria  normal  0.156001  n/a   
 
 
-
 
NC_011989  Avi_3273  transcriptional regulator LuxR family  43.75 
 
 
241 aa  57.4  0.0000004  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3804  two component transcriptional regulator, LuxR family  46.97 
 
 
216 aa  57.4  0.0000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.185264  normal 
 
 
-
 
NC_007413  Ava_2324  two component LuxR family transcriptional regulator  44.93 
 
 
245 aa  57.4  0.0000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.42123  normal 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  47.46 
 
 
225 aa  57.4  0.0000004  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_011369  Rleg2_0307  transcriptional regulator, LuxR family  51.56 
 
 
248 aa  57.4  0.0000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0339  transcriptional regulator, LuxR family  51.56 
 
 
248 aa  57.4  0.0000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.872821  normal  0.0558568 
 
 
-
 
NC_008578  Acel_1390  two component LuxR family transcriptional regulator  47.76 
 
 
225 aa  57.8  0.0000004  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4323  two component LuxR family transcriptional regulator  42.47 
 
 
246 aa  57.4  0.0000004  Roseiflexus sp. RS-1  Bacteria  normal  0.239635  normal  0.317944 
 
 
-
 
NC_002936  DET1350  LuxR family DNA-binding response regulator  39.44 
 
 
225 aa  57  0.0000006  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.00111586  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  46.03 
 
 
219 aa  57  0.0000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0973  two component LuxR family transcriptional regulator  45.9 
 
 
216 aa  57  0.0000006  Acidothermus cellulolyticus 11B  Bacteria  normal  0.255067  normal  0.404517 
 
 
-
 
NC_014248  Aazo_0930  LuxR family two component transcriptional regulator  35.51 
 
 
240 aa  57  0.0000006  'Nostoc azollae' 0708  Bacteria  normal  0.545376  n/a   
 
 
-
 
NC_014213  Mesil_3486  hypothetical protein  45.59 
 
 
206 aa  57  0.0000006  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS4385  germination protein GerE  45.76 
 
 
74 aa  56.6  0.0000007  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4226  germination protein  45.76 
 
 
74 aa  56.6  0.0000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4329  LuxR family transcriptional regulator  45.76 
 
 
74 aa  56.6  0.0000007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4238  germination protein  45.76 
 
 
74 aa  56.6  0.0000007  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4609  germination protein GerE  45.76 
 
 
74 aa  56.6  0.0000007  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4629  germination protein GerE  45.76 
 
 
74 aa  56.6  0.0000007  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  36.84 
 
 
209 aa  56.6  0.0000007  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_011729  PCC7424_5070  two component transcriptional regulator, LuxR family  37.5 
 
 
210 aa  56.6  0.0000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.744929 
 
 
-
 
NC_007530  GBAA_4724  germination protein GerE  45.76 
 
 
74 aa  56.6  0.0000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.105908  n/a   
 
 
-
 
NC_011772  BCG9842_B0626  germination protein GerE  45.76 
 
 
74 aa  56.6  0.0000007  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  44.12 
 
 
209 aa  56.6  0.0000007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_009901  Spea_0829  two component LuxR family transcriptional regulator  46.97 
 
 
209 aa  56.2  0.0000008  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00236991  n/a   
 
 
-
 
NC_011894  Mnod_0475  transcriptional regulator, LuxR family  50.82 
 
 
123 aa  56.6  0.0000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.282737  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  47.46 
 
 
224 aa  56.6  0.0000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  33.05 
 
 
226 aa  56.2  0.0000009  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013216  Dtox_3280  two component transcriptional regulator, LuxR family  44.62 
 
 
223 aa  56.2  0.0000009  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  32.32 
 
 
224 aa  56.2  0.0000009  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  45.16 
 
 
225 aa  56.2  0.0000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
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