Gene Dtox_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3280 
Symbol 
ID8430274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3476223 
End bp3476894 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content31% 
IMG OID645035518 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003192637 
Protein GI258516415 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATATAA TCAGAATTTT AATAGTAGCT GAAGATATTT CGTCAAGACG CGGTTTAGTA 
TCTATTTTTT CTTTGGAAAG CATGTTTGAT ATGTTAGGTG GTTATTCCAT TGATGAAGCG
ATAAATAAAT TAGTCTTGTT ACAACCTGAT GTAGTACTAA TTAACATAGT AGGTGATATA
TCAATATATA TGTTGTTGAT AAAAAAGATT AAAAGCGAGT GTCCATATAG TTTGGTATTA
TCAATAATAG ATAATAAAAA GTCGGAAGAA ATCGCAAAAG TATTGAATCA AGGTTTAGAT
GGTTATATAC CTAAGGGAGT TTTGAGTGGA TATTTGGTTA AAATAGTAGA GCTCTCCTGT
TATACGGGTC TTTTTTGTCT CCCCGGATTT GTAAAAAATA TGGTTTCATT TAACAGTTCT
AAAAAAAATA ATATACATAA AATGAAAAAT AGTGTAGTAG AGAGTTGTGA AAACCTATCC
AAGCGAGAAA TGGAAATACT GAAACTGATG TCTCAAAATC ATTCAAACAC TGAAATAGCC
GGTATGTTGT ACATAAGTCT ACCTACAGTG AAGACTCACG TCAGCAATAT ACTGCGTAAG
TTAGGCCAGC AAAATAGAGC TCAAGCTATA TTATATTCTA TAGCAACTGG CCTAATAAAT
AATTCTTTAT AA
 
Protein sequence
MDIIRILIVA EDISSRRGLV SIFSLESMFD MLGGYSIDEA INKLVLLQPD VVLINIVGDI 
SIYMLLIKKI KSECPYSLVL SIIDNKKSEE IAKVLNQGLD GYIPKGVLSG YLVKIVELSC
YTGLFCLPGF VKNMVSFNSS KKNNIHKMKN SVVESCENLS KREMEILKLM SQNHSNTEIA
GMLYISLPTV KTHVSNILRK LGQQNRAQAI LYSIATGLIN NSL