Gene Rleg_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0339 
Symbol 
ID8011549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp349702 
End bp350448 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID644822934 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_002974189 
Protein GI241203093 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.872821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0558568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTATC CATCAGGCAG GACCATGAGC AGCGCCGAGC AGCTGCGAAT GGTACGTGTG 
AACAGGATTT CCAGCCGGTC CGATCTTTTT CCGCGGCTGA TCGCGATGCA GAAGCTCGCC
GATGCGCAAG GCTTCGCGAT CTTCCGCGTC AGCGGCTCGG GCATTCCGGC AAAGCAGCGG
CTTGTCTGCG AGCTCGAGAA CTGGGGGTCT TCCAATGCCG GTTTCGGCAA GGCCTTCACG
GATGCCTACG GCGATATTCT TCTCGACCAT ATCGACAAGT CGCTGCTGCC GCTCTCATGG
GCAGGCGGTT ACGACCGTGC GGCACCCGGT CCGGCGGACT TCTCGCCGTT CATGACGCGG
CTGCAGGACG GTATTCTGCC TTTCTCCGGA CTTGCCTTTC CGGTGCGGCT TGGCGCCGTC
GGCAACGGTT TCATCCTTTT CACCGGCGAT GAGATCGATC CTTCGAGCGA TACCATCGTC
GAGCTGCACG GTCGATGCTG CCATATCATG ATGGATCTGC TCTCGCTCGA CGAGCGCCGC
ACGGCGGCTG CCGAGGCGCT CAGCGAACGC GAGATCGCCT GTCTGCAATT GGCCGGCGAC
GGCCGCATCA GCGAAGAGAT TGCCGACAAG CTCGGCCTGT CCGTGCACAC CGTGAACGCC
TATCTCGGCT CGGCGACCAT CAAGCTCGAT TCCGTCAATC GCATCCAGGC GATCGCCAAG
GCGATCCGGC TCGGTTATAT CAGCTGA
 
Protein sequence
MGYPSGRTMS SAEQLRMVRV NRISSRSDLF PRLIAMQKLA DAQGFAIFRV SGSGIPAKQR 
LVCELENWGS SNAGFGKAFT DAYGDILLDH IDKSLLPLSW AGGYDRAAPG PADFSPFMTR
LQDGILPFSG LAFPVRLGAV GNGFILFTGD EIDPSSDTIV ELHGRCCHIM MDLLSLDERR
TAAAEALSER EIACLQLAGD GRISEEIADK LGLSVHTVNA YLGSATIKLD SVNRIQAIAK
AIRLGYIS