More than 300 homologs were found in PanDaTox collection
for query gene Namu_2440 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013235  Namu_2440  two component transcriptional regulator, LuxR family  100 
 
 		 220 aa  441  1e-123  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000119534  normal  0.0380024 
 
 
-
 
NC_008699  Noca_1356  regulatory protein, LuxR  51.89 
 
 		 217 aa  204  1e-51  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  38.76 
 
 		 209 aa  129  5.0000000000000004e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_008726  Mvan_1358  two component LuxR family transcriptional regulator  37.67 
 
 		 220 aa  120  1.9999999999999998e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110964  normal  1 
 
 
-
 
NC_008146  Mmcs_1056  two component LuxR family transcriptional regulator  34.88 
 
 		 219 aa  113  3e-24  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_1072  two component LuxR family transcriptional regulator  34.88 
 
 		 219 aa  113  3e-24  Mycobacterium sp. KMS  Bacteria  normal  0.562029  normal  0.0679961 
 
 
-
 
NC_009077  Mjls_1083  two component LuxR family transcriptional regulator  34.88 
 
 		 219 aa  113  3e-24  Mycobacterium sp. JLS  Bacteria  normal  0.605869  normal  1 
 
 
-
 
NC_013510  Tcur_1651  two component transcriptional regulator, LuxR family  33.8 
 
 		 218 aa  107  2e-22  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000163278  n/a   
 
 
-
 
NC_008699  Noca_3664  regulatory protein, LuxR  35.19 
 
 		 215 aa  102  7e-21  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0180  two component transcriptional regulator, LuxR family  34.95 
 
 		 216 aa  100  1e-20  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.245465  n/a   
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  33.03 
 
 		 235 aa  96.3  4e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  30.41 
 
 		 215 aa  94.7  1e-18  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  36.07 
 
 		 216 aa  92.8  4e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  30.41 
 
 		 215 aa  92.4  5e-18  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  33.8 
 
 		 225 aa  91.7  8e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  35.48 
 
 		 213 aa  91.7  9e-18  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  30.09 
 
 		 215 aa  90.9  1e-17  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  30.09 
 
 		 215 aa  90.9  1e-17  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  29.95 
 
 		 215 aa  90.9  1e-17  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  30.41 
 
 		 215 aa  90.5  2e-17  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  30.41 
 
 		 215 aa  90.5  2e-17  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  31.92 
 
 		 222 aa  90.5  2e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  30.41 
 
 		 215 aa  90.5  2e-17  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  30.41 
 
 		 215 aa  90.5  2e-17  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  30.41 
 
 		 215 aa  90.5  2e-17  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_008699  Noca_1337  regulatory protein, LuxR  41.84 
 
 		 188 aa  89.7  3e-17  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  30.91 
 
 		 250 aa  88.6  7e-17  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  32.23 
 
 		 222 aa  87.4  1e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  34.6 
 
 		 212 aa  87  2e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  30.18 
 
 		 220 aa  87  2e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.6 
 
 		 230 aa  84.7  9e-16  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_011988  Avi_5188  two component response regulator  31.45 
 
 		 220 aa  84.3  0.000000000000001  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  32 
 
 		 239 aa  84.3  0.000000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  31.56 
 
 		 226 aa  84  0.000000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  28.44 
 
 		 213 aa  83.2  0.000000000000003  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  31.88 
 
 		 242 aa  83.2  0.000000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  30.95 
 
 		 207 aa  83.2  0.000000000000003  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  30.09 
 
 		 221 aa  82.8  0.000000000000004  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  33.65 
 
 		 206 aa  82.8  0.000000000000004  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  30.77 
 
 		 218 aa  82.4  0.000000000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  31.78 
 
 		 227 aa  82.4  0.000000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  33.78 
 
 		 223 aa  82.4  0.000000000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_0533  two component LuxR family transcriptional regulator  35.46 
 
 		 219 aa  82  0.000000000000006  Frankia sp. EAN1pec  Bacteria  normal  0.405575  normal  1 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  30 
 
 		 238 aa  82  0.000000000000007  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  32.58 
 
 		 227 aa  81.6  0.000000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  28.44 
 
 		 253 aa  81.6  0.000000000000009  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  27.62 
 
 		 219 aa  81.6  0.000000000000009  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  29.41 
 
 		 208 aa  81.3  0.00000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  28.71 
 
 		 213 aa  81.3  0.00000000000001  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  27.62 
 
 		 219 aa  81.3  0.00000000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  33.65 
 
 		 213 aa  81.3  0.00000000000001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3359  two component transcriptional regulator, LuxR family  30.28 
 
 		 219 aa  81.3  0.00000000000001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00321115  hitchhiker  0.000132937 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  27.05 
 
 		 210 aa  81.3  0.00000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  30.63 
 
 		 221 aa  80.5  0.00000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007954  Sden_3055  response regulator receiver  29.86 
 
 		 219 aa  80.5  0.00000000000002  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  31.14 
 
 		 224 aa  80.5  0.00000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  34.58 
 
 		 210 aa  80.5  0.00000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  31.78 
 
 		 231 aa  80.1  0.00000000000002  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  30.81 
 
 		 212 aa  80.5  0.00000000000002  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.967001 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  30.81 
 
 		 220 aa  80.1  0.00000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  30.04 
 
 		 234 aa  79.7  0.00000000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  33.8 
 
 		 221 aa  79.7  0.00000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  30.18 
 
 		 223 aa  79.3  0.00000000000004  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  29.25 
 
 		 213 aa  79.3  0.00000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  30.53 
 
 		 220 aa  79  0.00000000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  27.48 
 
 		 234 aa  79  0.00000000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.8 
 
 		 229 aa  79  0.00000000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  29.67 
 
 		 208 aa  79  0.00000000000006  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  30.73 
 
 		 213 aa  78.6  0.00000000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  27.27 
 
 		 210 aa  78.6  0.00000000000008  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  27.27 
 
 		 210 aa  78.6  0.00000000000008  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  27.27 
 
 		 210 aa  78.6  0.00000000000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  27.27 
 
 		 210 aa  78.6  0.00000000000008  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  29.95 
 
 		 214 aa  78.6  0.00000000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  27.27 
 
 		 210 aa  78.6  0.00000000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  27.27 
 
 		 210 aa  78.2  0.00000000000008  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  30.33 
 
 		 212 aa  78.6  0.00000000000008  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  27.27 
 
 		 210 aa  78.6  0.00000000000008  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_013235  Namu_3409  two component transcriptional regulator, LuxR family  31.51 
 
 		 221 aa  78.2  0.00000000000009  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000306896  hitchhiker  0.000114505 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  27.73 
 
 		 224 aa  78.2  0.00000000000009  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  34.13 
 
 		 220 aa  78.2  0.00000000000009  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  28.64 
 
 		 237 aa  77.8  0.0000000000001  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  32.09 
 
 		 224 aa  77.4  0.0000000000001  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  32.09 
 
 		 224 aa  77.4  0.0000000000001  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  27.27 
 
 		 210 aa  77.8  0.0000000000001  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_007333  Tfu_2278  LuxR response regulator receiver  32.88 
 
 		 217 aa  77.8  0.0000000000001  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  28.37 
 
 		 215 aa  77.8  0.0000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  28.64 
 
 		 237 aa  77.4  0.0000000000001  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  26.64 
 
 		 303 aa  78.2  0.0000000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  27.44 
 
 		 216 aa  77.8  0.0000000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  28.91 
 
 		 217 aa  78.2  0.0000000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  36.84 
 
 		 218 aa  77.8  0.0000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  33.65 
 
 		 212 aa  77.4  0.0000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  29.05 
 
 		 209 aa  77  0.0000000000002  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  27.78 
 
 		 242 aa  77.4  0.0000000000002  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  27.27 
 
 		 210 aa  77  0.0000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  32.23 
 
 		 212 aa  77.4  0.0000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  31 
 
 		 232 aa  77  0.0000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  32.24 
 
 		 228 aa  77  0.0000000000002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  26.94 
 
 		 224 aa  77  0.0000000000002  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
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