More than 300 homologs were found in PanDaTox collection
for query gene Noca_1356 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_1356  regulatory protein, LuxR  100 
 
 
217 aa  436  1e-121  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2440  two component transcriptional regulator, LuxR family  51.18 
 
 
220 aa  198  3.9999999999999996e-50  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000119534  normal  0.0380024 
 
 
-
 
NC_008699  Noca_3664  regulatory protein, LuxR  42.86 
 
 
215 aa  128  8.000000000000001e-29  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1337  regulatory protein, LuxR  46.11 
 
 
188 aa  122  4e-27  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1056  two component LuxR family transcriptional regulator  39.09 
 
 
219 aa  121  6e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1072  two component LuxR family transcriptional regulator  39.09 
 
 
219 aa  121  6e-27  Mycobacterium sp. KMS  Bacteria  normal  0.562029  normal  0.0679961 
 
 
-
 
NC_009077  Mjls_1083  two component LuxR family transcriptional regulator  39.09 
 
 
219 aa  121  6e-27  Mycobacterium sp. JLS  Bacteria  normal  0.605869  normal 
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  36.74 
 
 
209 aa  119  4.9999999999999996e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_013510  Tcur_1651  two component transcriptional regulator, LuxR family  37.21 
 
 
218 aa  108  6e-23  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000163278  n/a   
 
 
-
 
NC_013124  Afer_0180  two component transcriptional regulator, LuxR family  38.46 
 
 
216 aa  108  8.000000000000001e-23  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.245465  n/a   
 
 
-
 
NC_008726  Mvan_1358  two component LuxR family transcriptional regulator  35.94 
 
 
220 aa  101  1e-20  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110964  normal 
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  32.86 
 
 
212 aa  92  6e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  32.69 
 
 
213 aa  89  5e-17  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1938  two component LuxR family transcriptional regulator  30.92 
 
 
209 aa  87.4  1e-16  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  30.92 
 
 
209 aa  87.4  1e-16  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  33.49 
 
 
210 aa  87  2e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  28.85 
 
 
211 aa  87  2e-16  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  32.71 
 
 
218 aa  85.9  4e-16  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  32.86 
 
 
235 aa  85.9  4e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  28.57 
 
 
213 aa  85.9  5e-16  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  31.9 
 
 
207 aa  84.3  0.000000000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  31.58 
 
 
210 aa  84.3  0.000000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  34.17 
 
 
219 aa  83.6  0.000000000000002  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  30.41 
 
 
210 aa  83.6  0.000000000000002  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  34.45 
 
 
206 aa  83.6  0.000000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  30.41 
 
 
210 aa  83.6  0.000000000000002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  30.41 
 
 
210 aa  83.6  0.000000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  30.41 
 
 
210 aa  83.6  0.000000000000002  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  30.41 
 
 
210 aa  83.6  0.000000000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  30.41 
 
 
210 aa  83.6  0.000000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  31.43 
 
 
210 aa  84  0.000000000000002  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  31.65 
 
 
217 aa  83.6  0.000000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  30.41 
 
 
210 aa  83.6  0.000000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  31.66 
 
 
219 aa  84  0.000000000000002  Pseudomonas putida GB-1  Bacteria  normal  normal  0.869411 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  31.05 
 
 
210 aa  83.2  0.000000000000003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  31.78 
 
 
218 aa  82.4  0.000000000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  32.66 
 
 
219 aa  82.4  0.000000000000004  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  35.12 
 
 
209 aa  82  0.000000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  31.05 
 
 
210 aa  82.4  0.000000000000005  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_013757  Gobs_4942  two component transcriptional regulator, LuxR family  33.79 
 
 
222 aa  82.4  0.000000000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  31.48 
 
 
222 aa  81.6  0.000000000000007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  30.73 
 
 
209 aa  81.6  0.000000000000007  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  27.98 
 
 
216 aa  81.6  0.000000000000009  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  33.96 
 
 
216 aa  81.3  0.00000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  31.1 
 
 
227 aa  81.3  0.00000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  31.08 
 
 
221 aa  80.5  0.00000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.21 
 
 
214 aa  80.1  0.00000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  31.98 
 
 
219 aa  80.1  0.00000000000002  Pseudomonas putida W619  Bacteria  normal  0.118638  normal 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  30.23 
 
 
214 aa  80.5  0.00000000000002  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  37.12 
 
 
218 aa  80.5  0.00000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  37.18 
 
 
221 aa  79.7  0.00000000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  32.72 
 
 
218 aa  80.1  0.00000000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_05830  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.28 
 
 
238 aa  79.7  0.00000000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.388223  n/a   
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  31.08 
 
 
230 aa  79.7  0.00000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  32.21 
 
 
207 aa  79.3  0.00000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  30.59 
 
 
217 aa  79.3  0.00000000000004  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.14 
 
 
223 aa  79.3  0.00000000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  28.38 
 
 
218 aa  79.3  0.00000000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  33.64 
 
 
244 aa  79  0.00000000000005  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  30.56 
 
 
226 aa  79  0.00000000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  33.48 
 
 
225 aa  79  0.00000000000005  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  33.33 
 
 
207 aa  78.6  0.00000000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  34.93 
 
 
211 aa  78.6  0.00000000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  37.42 
 
 
221 aa  78.2  0.00000000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.04 
 
 
221 aa  78.2  0.00000000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  29.63 
 
 
237 aa  78.2  0.00000000000009  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  32.35 
 
 
206 aa  78.2  0.00000000000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00252848 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  30.73 
 
 
220 aa  77.8  0.0000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  30.66 
 
 
215 aa  77.8  0.0000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  29.96 
 
 
221 aa  77.8  0.0000000000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_007333  Tfu_2278  LuxR response regulator receiver  32.11 
 
 
217 aa  78.2  0.0000000000001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  29.49 
 
 
224 aa  77.4  0.0000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  29.73 
 
 
233 aa  77.8  0.0000000000001  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  31.02 
 
 
218 aa  77.4  0.0000000000001  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  31.08 
 
 
250 aa  78.2  0.0000000000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  31.02 
 
 
218 aa  77.4  0.0000000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  32.39 
 
 
222 aa  77.8  0.0000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_009430  Rsph17025_4179  hypothetical protein  36.99 
 
 
232 aa  77.8  0.0000000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.365276 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  30.92 
 
 
209 aa  77.4  0.0000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  29.22 
 
 
232 aa  77  0.0000000000002  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  27.14 
 
 
215 aa  77.4  0.0000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1422  DNA-binding response regulator VraR  28.64 
 
 
209 aa  76.6  0.0000000000002  Staphylococcus epidermidis RP62A  Bacteria  normal  0.871667  n/a   
 
 
-
 
NC_010718  Nther_2079  two component transcriptional regulator, LuxR family  30.33 
 
 
212 aa  77  0.0000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  30.99 
 
 
209 aa  77  0.0000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  30.32 
 
 
239 aa  77.4  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  31.1 
 
 
211 aa  77  0.0000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  31.88 
 
 
214 aa  77.4  0.0000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  30.88 
 
 
220 aa  77  0.0000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3070  two component transcriptional regulator, LuxR family  27.23 
 
 
216 aa  77.4  0.0000000000002  Shewanella baltica OS223  Bacteria  decreased coverage  0.000689776  unclonable  0.00000000000283062 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  30.53 
 
 
228 aa  77  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  29.36 
 
 
242 aa  76.6  0.0000000000003  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  31.02 
 
 
218 aa  76.6  0.0000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4860  two component transcriptional regulator, LuxR family  31.48 
 
 
236 aa  76.6  0.0000000000003  Methylobacterium populi BJ001  Bacteria  normal  normal  0.142587 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  34.42 
 
 
229 aa  76.6  0.0000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  28.5 
 
 
213 aa  76.3  0.0000000000003  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  32.55 
 
 
212 aa  76.6  0.0000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_2103  two component transcriptional regulator, LuxR family  29.44 
 
 
210 aa  76.3  0.0000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  27.57 
 
 
215 aa  76.3  0.0000000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  28.64 
 
 
215 aa  75.9  0.0000000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  28.77 
 
 
232 aa  76.3  0.0000000000004  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
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