Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1422 |
Symbol | vraR |
ID | 3241920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1484739 |
End bp | 1485368 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637168107 |
Product | DNA-binding response regulator VraR |
Protein accession | YP_188991 |
Protein GI | 57867340 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.871667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGATTA AAGTTTTATT TGTTGATGAT CATGAAATGG TAAGAATCGG TATTTCAAGC TATCTTTCAA CTCAAGAAGA TATAGAAGTA GTAGGTGAGG GTGCTTCTGG TAAAGATGCT ATCACCAAAG CGCATGAGCT AAAACCAGAT TTAATATTAA TGGATTTACT TATGGACGAT ATGGATGGTG TAGAAGCAAC TACTGAAATA AAAAAAGATT TACCTCAAAT TAAAGTAGTC ATGTTAACAA GCTTTATAGA GGATAAAGAA GTTTATCGTG CACTTGATTC TGGAGTAGAT AGTTATATTT TAAAGACAAC AAGTGCAAGT GATATAGCTG ACGCTGTGCG TAAAACGTAT GAAGGTGAAT CAGTATTTGA ACCAGAAGTG TTAGTAAAAA TGCGCAATCG TATGAAAAAA CGTGCCGAGC TTTATGAAAT GTTGACAGAA AGAGAAATGG AGATCCTATT ACTTATAGCT AAAGGATACT CTAACCAAGA GATTGCAAGC GCCTCTCATA TCACCATCAA AACAGTAAAA ACTCATGTAA GTAACATACT AAGTAAATTA GAAGTACAAG ATCGAACACA AGCAGTAATA TATGCGTTCC AGCATAATTT AATTCAATAA
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Protein sequence | MAIKVLFVDD HEMVRIGISS YLSTQEDIEV VGEGASGKDA ITKAHELKPD LILMDLLMDD MDGVEATTEI KKDLPQIKVV MLTSFIEDKE VYRALDSGVD SYILKTTSAS DIADAVRKTY EGESVFEPEV LVKMRNRMKK RAELYEMLTE REMEILLLIA KGYSNQEIAS ASHITIKTVK THVSNILSKL EVQDRTQAVI YAFQHNLIQ
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