More than 300 homologs were found in PanDaTox collection
for query gene Noca_1337 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_1337  regulatory protein, LuxR  100 
 
 
188 aa  371  1e-102  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1356  regulatory protein, LuxR  45.18 
 
 
217 aa  145  5e-34  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3664  regulatory protein, LuxR  44.21 
 
 
215 aa  122  3e-27  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2440  two component transcriptional regulator, LuxR family  41.84 
 
 
220 aa  113  2.0000000000000002e-24  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000119534  normal  0.0380024 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  40.98 
 
 
225 aa  80.1  0.00000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  39.34 
 
 
225 aa  78.6  0.00000000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013510  Tcur_1253  two component transcriptional regulator, LuxR family  35.84 
 
 
203 aa  75.5  0.0000000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  38.89 
 
 
220 aa  72.8  0.000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  37.14 
 
 
222 aa  72.4  0.000000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  34.18 
 
 
209 aa  72  0.000000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  39.5 
 
 
211 aa  71.6  0.000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  35.21 
 
 
225 aa  70.5  0.00000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.02 
 
 
214 aa  70.9  0.00000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0647  two component LuxR family transcriptional regulator  33.13 
 
 
225 aa  70.5  0.00000000001  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.59 
 
 
221 aa  70.5  0.00000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  34.33 
 
 
235 aa  70.1  0.00000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  33.8 
 
 
218 aa  69.3  0.00000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  37.07 
 
 
213 aa  69.3  0.00000000003  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  36.59 
 
 
218 aa  69.3  0.00000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  35.54 
 
 
216 aa  69.3  0.00000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal 
 
 
-
 
NC_013131  Caci_5428  two component transcriptional regulator, LuxR family  39.88 
 
 
201 aa  68.9  0.00000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.358603 
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  34.72 
 
 
218 aa  68.6  0.00000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_5955  two component LuxR family transcriptional regulator  33.33 
 
 
215 aa  67.8  0.0000000001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.132796 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  27.93 
 
 
242 aa  67.4  0.0000000001  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  37.68 
 
 
218 aa  66.6  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  39.37 
 
 
226 aa  66.2  0.0000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  50.79 
 
 
224 aa  65.9  0.0000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_008463  PA14_06950  LuxR family transcriptional regulator  44.3 
 
 
496 aa  65.9  0.0000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.490761  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  35.48 
 
 
218 aa  66.2  0.0000000003  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014213  Mesil_3486  hypothetical protein  34.78 
 
 
206 aa  65.9  0.0000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  36.09 
 
 
221 aa  65.5  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  29.37 
 
 
209 aa  65.5  0.0000000004  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_009656  PSPA7_0636  LuxR family transcriptional regulator  44.3 
 
 
496 aa  65.5  0.0000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  0.223361  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  36.72 
 
 
225 aa  65.5  0.0000000005  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013235  Namu_1210  two component transcriptional regulator, LuxR family  36.79 
 
 
198 aa  65.1  0.0000000005  Nakamurella multipartita DSM 44233  Bacteria  normal  0.292938  normal 
 
 
-
 
NC_008699  Noca_0992  regulatory protein, LuxR  37.39 
 
 
218 aa  65.1  0.0000000006  Nocardioides sp. JS614  Bacteria  normal  0.850793  n/a   
 
 
-
 
NC_011729  PCC7424_0807  two component transcriptional regulator, LuxR family  31.85 
 
 
228 aa  65.1  0.0000000006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.218712 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  27.14 
 
 
216 aa  65.1  0.0000000006  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  38.71 
 
 
218 aa  65.1  0.0000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  36.84 
 
 
247 aa  65.1  0.0000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_007413  Ava_4518  two component LuxR family transcriptional regulator  47.69 
 
 
236 aa  65.1  0.0000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1056  two component LuxR family transcriptional regulator  33.02 
 
 
219 aa  64.7  0.0000000007  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1072  two component LuxR family transcriptional regulator  33.02 
 
 
219 aa  64.7  0.0000000007  Mycobacterium sp. KMS  Bacteria  normal  0.562029  normal  0.0679961 
 
 
-
 
NC_009077  Mjls_1083  two component LuxR family transcriptional regulator  33.02 
 
 
219 aa  64.7  0.0000000007  Mycobacterium sp. JLS  Bacteria  normal  0.605869  normal 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  38.6 
 
 
215 aa  64.7  0.0000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal 
 
 
-
 
NC_013161  Cyan8802_3480  two component transcriptional regulator, LuxR family  32.84 
 
 
210 aa  64.7  0.0000000008  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.147525 
 
 
-
 
NC_011726  PCC8801_2623  two component transcriptional regulator, LuxR family  32.84 
 
 
210 aa  64.7  0.0000000008  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  38.98 
 
 
222 aa  64.7  0.0000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  35.94 
 
 
211 aa  64.7  0.0000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  35.65 
 
 
207 aa  64.7  0.0000000009  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0533  two component LuxR family transcriptional regulator  34.11 
 
 
219 aa  64.3  0.0000000009  Frankia sp. EAN1pec  Bacteria  normal  0.405575  normal 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  34.71 
 
 
215 aa  63.9  0.000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3116  two component transcriptional regulator, LuxR family  35.11 
 
 
215 aa  63.9  0.000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0180  two component transcriptional regulator, LuxR family  38.46 
 
 
216 aa  64.3  0.000000001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.245465  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  28.57 
 
 
241 aa  64.3  0.000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_013093  Amir_6539  two component transcriptional regulator, LuxR family  43.02 
 
 
198 aa  63.9  0.000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.370011  n/a   
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.82 
 
 
222 aa  64.3  0.000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  37.39 
 
 
206 aa  63.9  0.000000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  34.68 
 
 
212 aa  64.3  0.000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_013061  Phep_1616  response regulator receiver  31.82 
 
 
210 aa  64.3  0.000000001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.869432  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.09 
 
 
239 aa  63.9  0.000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013169  Ksed_06250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.76 
 
 
228 aa  63.9  0.000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4222  ATP-dependent transcription regulator LuxR  54.9 
 
 
309 aa  63.9  0.000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.157864 
 
 
-
 
NC_013510  Tcur_1651  two component transcriptional regulator, LuxR family  34.01 
 
 
218 aa  63.2  0.000000002  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000163278  n/a   
 
 
-
 
NC_013159  Svir_04700  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.02 
 
 
198 aa  63.5  0.000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.162406  normal 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  38.05 
 
 
209 aa  63.5  0.000000002  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  34.04 
 
 
238 aa  63.2  0.000000002  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  36.89 
 
 
210 aa  63.5  0.000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  34.51 
 
 
222 aa  63.2  0.000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  34.88 
 
 
228 aa  63.5  0.000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  34.96 
 
 
217 aa  63.2  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  35.71 
 
 
227 aa  63.2  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  29.81 
 
 
217 aa  63.2  0.000000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  31.93 
 
 
224 aa  63.5  0.000000002  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  35.94 
 
 
224 aa  63.5  0.000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  33.9 
 
 
209 aa  63.2  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  35.71 
 
 
226 aa  63.5  0.000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  34.04 
 
 
250 aa  63.5  0.000000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  36.75 
 
 
212 aa  63.5  0.000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  37.96 
 
 
227 aa  63.5  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  33.33 
 
 
234 aa  62.8  0.000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.34 
 
 
222 aa  62.4  0.000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  30.1 
 
 
218 aa  62.4  0.000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_008578  Acel_0365  two component LuxR family transcriptional regulator  36.15 
 
 
199 aa  62.8  0.000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  0.210231  normal  0.243335 
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  32.79 
 
 
225 aa  62.8  0.000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.665179 
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  31.21 
 
 
224 aa  62.8  0.000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  35.92 
 
 
230 aa  62.8  0.000000003  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  37.6 
 
 
221 aa  62.8  0.000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  33.06 
 
 
219 aa  62.8  0.000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  36.89 
 
 
212 aa  62.8  0.000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  32.93 
 
 
218 aa  62  0.000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  28.47 
 
 
214 aa  62  0.000000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  37.93 
 
 
212 aa  62.4  0.000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  31.55 
 
 
215 aa  62.4  0.000000004  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1011  two component transcriptional regulator, LuxR family  36.43 
 
 
203 aa  62  0.000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.109267 
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  34.38 
 
 
212 aa  62.4  0.000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  31.03 
 
 
232 aa  62.4  0.000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013739  Cwoe_5287  transcriptional regulator, LuxR family  31.32 
 
 
206 aa  62  0.000000005  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  37.82 
 
 
213 aa  62  0.000000005  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_012669  Bcav_1611  two component transcriptional regulator, LuxR family  34.11 
 
 
208 aa  62  0.000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal 
 
 
-
 
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