Gene Noca_1356 details

Gene Information

• Locus tag: Noca_1356
• ID: 4598522
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1434044
• End bp: 1434697
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639775953
• Product: regulatory protein, LuxR
• Protein accession: YP_922557
• Protein GI: 119715592
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAACT CGCCGATCCG GGTCGCGATC GTCAACGACT ACGAGATCGT CATCGCGGGA 
GTCGCGGCGA TGCTCGCCCC CCACCACGAC CGCGTCGCGG TCGTCGAGCT CGACTCGGGG 
CTGCCCGTCA TCAGTGACGT GGACGTGATC CTCTACGACA CCTTCGGCCA GGTGCAGGGC 
GACGCGGTCG ACCTCGAGGA CCTGCTCGCC GGCGACGCCG TGCCGGTGGC GATCTTCAGC 
TGGAACCTGC AGCCCGACCT CGTGCAGCGG GCGCTCGAGC GCGGGGCCGC CGGCTACCTC 
TCCAAGGCCC TGAACGCCGG CGAGATCGTG GCCGCCATCG AGGCGATCCA CCGCGGTGAG 
ACCGTCGCGC CGCCGCCGTC CGCCGAGACC GCCGACCGGG AGGTGACGGG GGAGTGGCCC 
GGTCGCGACG TCGGTCTCAC CGCCCGCGAG GCGGAGGTGC TGGCGCTGAT CACGCAGGGC 
CTGAGCAACC AGGAGATCGC CGAGCACACC TACCTGTCCA TCAACTCGGT GAAGACCTAC 
ATCCGCACCG CCTACCGCAA GATCGAGGTC ACCCGGCGGG CGCAGGCGGT CGCCTGGGGG 
ATGACCCACG GCTTCTCGCC CGACCGTCTC CGCAGCGTCG CGACCGGTCA CTGA 

 

Protein sequence

MSNSPIRVAI VNDYEIVIAG VAAMLAPHHD RVAVVELDSG LPVISDVDVI LYDTFGQVQG 
DAVDLEDLLA GDAVPVAIFS WNLQPDLVQR ALERGAAGYL SKALNAGEIV AAIEAIHRGE 
TVAPPPSAET ADREVTGEWP GRDVGLTARE AEVLALITQG LSNQEIAEHT YLSINSVKTY 
IRTAYRKIEV TRRAQAVAWG MTHGFSPDRL RSVATGH