Gene Avi_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3273 
SymbolavxR 
ID7387443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2709484 
End bp2710209 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content55% 
IMG OID643652173 
Producttranscriptional regulator LuxR family 
Protein accessionYP_002550357 
Protein GI222149400 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATCG CCGAGCGCCA GACACTGCTC AGTACAGAAA TAACCGCAAT GGAAAGCCGT 
GAGCATTGTG CGGAGATCCT GCGCACTGTT GCCCAGGCGT TTGGCCTGTC GCATGGCAGT
ATCCTGCTCG CACCGTGTGC GACCGATGTG CATCTCCTGC CACTGGTCAT GGAAACCACC
TTGCCGATGG AATTCGGCCA TGAATTCGAC CGCCACCAAT TTGTCAAATT CTGTCCGGTG
GTCAAGAAAT TCGCCGGCTC GATCCTGCCG CGAACCTGGG ACATGAAATT CAGGGAACCC
AATGACATGG CGGAGGAATG GCCGCCTGCC ATGCGCGACC TGATGATGCG GTTCAAGCTG
ATCGTCGGCG TTGTCTTCAT TTTCCCCTCC CTTGATTCCC GGCTGTATTT CATGCGGTTC
GATGGGGATC GCTCACCTCT CTCCCAATGC GAGGTCAATG AACTGGGCAT GCTGGCAATG
GCGGTTTTCG ACACCTATGA CCGCCTCCGC CGCACCGAGT TGATGAATGT CGATGTTCTC
TCCGTGCGCG AACTGGAAGT GCTTCGCTGG ACGGCGCAGG GCAAAACCTC GGTAGAAATT
GGCCAGATCC TCAGCCTCTC CGACCACACC ATAAACGCGT ATATGACAAC AGCTATGAAA
AAGCTGGATT GCGTCAACCG GACGCAATTG GTAGCAAAGG CCATTAGGCT GAAGCTCATT
CAATAA
 
Protein sequence
MLIAERQTLL STEITAMESR EHCAEILRTV AQAFGLSHGS ILLAPCATDV HLLPLVMETT 
LPMEFGHEFD RHQFVKFCPV VKKFAGSILP RTWDMKFREP NDMAEEWPPA MRDLMMRFKL
IVGVVFIFPS LDSRLYFMRF DGDRSPLSQC EVNELGMLAM AVFDTYDRLR RTELMNVDVL
SVRELEVLRW TAQGKTSVEI GQILSLSDHT INAYMTTAMK KLDCVNRTQL VAKAIRLKLI
Q