More than 300 homologs were found in PanDaTox collection
for query gene VEA_000055 on replicon NC_013457
Organism: Vibrio sp. Ex25



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013457  VEA_000055  methyl-accepting chemotaxis protein  100 
 
 
543 aa  1100    Vibrio sp. Ex25  Bacteria  decreased coverage  0.000458726  n/a   
 
 
-
 
NC_009457  VC0395_A0931  methyl-accepting chemotaxis protein  64.02 
 
 
543 aa  712    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0210  methyl-accepting chemotaxis protein  45 
 
 
543 aa  466  9.999999999999999e-131  Vibrio cholerae O395  Bacteria  decreased coverage  0.000000000000824359  n/a   
 
 
-
 
NC_009831  Ssed_3236  methyl-accepting chemotaxis protein  41.96 
 
 
544 aa  375  1e-102  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003886  methyl-accepting chemotaxis protein  38.04 
 
 
542 aa  348  1e-94  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  32.79 
 
 
546 aa  267  2.9999999999999995e-70  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_009901  Spea_3266  methyl-accepting chemotaxis sensory transducer  40.78 
 
 
543 aa  247  4e-64  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  33.81 
 
 
541 aa  245  9.999999999999999e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  35.27 
 
 
638 aa  243  7e-63  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009831  Ssed_2309  methyl-accepting chemotaxis protein-like protein  40.83 
 
 
547 aa  240  5.999999999999999e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  0.037772  hitchhiker  0.0000415162 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  39.77 
 
 
642 aa  234  4.0000000000000004e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  36.08 
 
 
642 aa  233  1e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  33.69 
 
 
541 aa  233  1e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  31.08 
 
 
541 aa  231  2e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  38.06 
 
 
637 aa  231  2e-59  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  39.6 
 
 
640 aa  232  2e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  32.13 
 
 
541 aa  231  2e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  32.72 
 
 
541 aa  232  2e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  32.86 
 
 
541 aa  230  4e-59  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  39.48 
 
 
629 aa  229  9e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  39.71 
 
 
633 aa  228  1e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  29.36 
 
 
540 aa  228  2e-58  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  33.16 
 
 
546 aa  228  2e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  33.33 
 
 
541 aa  228  2e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  32.32 
 
 
546 aa  228  3e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  32.55 
 
 
541 aa  227  4e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  31.08 
 
 
541 aa  226  6e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  39.66 
 
 
638 aa  226  1e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1418  chemotaxis sensory transducer  32.24 
 
 
541 aa  225  1e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  41.72 
 
 
624 aa  225  2e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  32.56 
 
 
546 aa  224  3e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  39.77 
 
 
650 aa  224  3e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  40.42 
 
 
638 aa  223  8e-57  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_010501  PputW619_2593  methyl-accepting chemotaxis sensory transducer  31.09 
 
 
540 aa  223  9.999999999999999e-57  Pseudomonas putida W619  Bacteria  normal  normal  0.591477 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  38.76 
 
 
619 aa  223  9.999999999999999e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  39.5 
 
 
543 aa  221  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  37.91 
 
 
544 aa  222  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  39.53 
 
 
681 aa  219  7.999999999999999e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  34.31 
 
 
541 aa  219  8.999999999999998e-56  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
541 aa  219  1e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
541 aa  219  1e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  33.92 
 
 
541 aa  219  1e-55  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  31.89 
 
 
541 aa  218  2e-55  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_007492  Pfl01_2907  chemotaxis sensory transducer  32.97 
 
 
541 aa  218  2e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.300582 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  39.52 
 
 
638 aa  218  2.9999999999999998e-55  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  35.62 
 
 
639 aa  217  4e-55  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  31.71 
 
 
541 aa  217  4e-55  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  32.8 
 
 
541 aa  217  5e-55  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  31.64 
 
 
541 aa  217  5e-55  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  31.64 
 
 
541 aa  217  5e-55  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  37.68 
 
 
640 aa  216  5.9999999999999996e-55  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  30.16 
 
 
557 aa  216  7e-55  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  32.36 
 
 
541 aa  216  7e-55  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
568 aa  216  9e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
541 aa  216  9.999999999999999e-55  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  39.52 
 
 
638 aa  216  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  30.49 
 
 
539 aa  216  9.999999999999999e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  39.52 
 
 
638 aa  216  9.999999999999999e-55  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  32.08 
 
 
570 aa  215  1.9999999999999998e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  39.4 
 
 
676 aa  214  2.9999999999999995e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  42.51 
 
 
636 aa  214  3.9999999999999995e-54  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  30.31 
 
 
539 aa  214  4.9999999999999996e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  39.47 
 
 
647 aa  213  5.999999999999999e-54  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  39.09 
 
 
634 aa  213  7e-54  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5569  methyl-accepting chemotaxis protein  31.81 
 
 
541 aa  213  7.999999999999999e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
552 aa  212  1e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  38.66 
 
 
533 aa  212  1e-53  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1150  chemotaxis sensory transducer  39.73 
 
 
551 aa  213  1e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  36.06 
 
 
555 aa  211  4e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  39.06 
 
 
533 aa  211  4e-53  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.06 
 
 
533 aa  211  4e-53  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
533 aa  210  5e-53  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  39.35 
 
 
550 aa  209  7e-53  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  37.78 
 
 
653 aa  209  1e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  31.27 
 
 
541 aa  208  2e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  33.59 
 
 
674 aa  208  2e-52  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  36.15 
 
 
672 aa  208  3e-52  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  39.43 
 
 
425 aa  207  3e-52  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  37.24 
 
 
673 aa  207  4e-52  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_007005  Psyr_2109  histidine kinase, HAMP region: chemotaxis sensory transducer  42.6 
 
 
539 aa  207  4e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.950044  normal  0.0787865 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  38.12 
 
 
564 aa  207  6e-52  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
572 aa  206  9e-52  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3082  methyl-accepting chemotaxis sensory transducer  38.37 
 
 
673 aa  205  2e-51  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  40.06 
 
 
647 aa  205  2e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  32.55 
 
 
541 aa  205  2e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
634 aa  204  3e-51  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5159  methyl-accepting chemotaxis protein  38.61 
 
 
638 aa  204  4e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  36.91 
 
 
634 aa  204  5e-51  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
634 aa  204  5e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  36.41 
 
 
568 aa  203  7e-51  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3323  methyl-accepting chemotaxis sensory transducer  30.11 
 
 
539 aa  203  7e-51  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
674 aa  203  7e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_004578  PSPTO_3291  methyl-accepting chemotaxis protein  29.14 
 
 
542 aa  203  8e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.470345  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  31.89 
 
 
541 aa  202  8e-51  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  38.28 
 
 
647 aa  202  9e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  37.64 
 
 
536 aa  202  9.999999999999999e-51  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  37.64 
 
 
640 aa  202  9.999999999999999e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3348  histidine kinase, HAMP region: chemotaxis sensory transducer  32.15 
 
 
542 aa  202  9.999999999999999e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.946905  normal  0.024921 
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  37.96 
 
 
640 aa  202  9.999999999999999e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  38.79 
 
 
716 aa  202  9.999999999999999e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
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