| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000055 |
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| Symbol | |
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| ID | 8558356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 61459 |
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| End bp | 63090 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407716 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_003287208 |
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| Protein GI | 262395355 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000458726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATCA AGAATCTTTC TATAGCGAAA AAGATATCGC TATCGTTTTT ACTCATTGCC
ATCGTCAACA TTGCGTTTGG CGTATTTTTA TCTACAGAGC TCAAAAGCAT TAAATCTGAG
CTTTTAAACT ATACCGATGA TACGCTTCCT GCTATGGAAA GAGTAGATTC GATCCGAGAT
CACTTGTCTC GCTGGCGCCG TGCTCAGTTT GCGACATACA CTTATGAAGA CGCAGACCAA
ATCAGAAACA AAATTGCCAG CAACATTCGC GAACGTGAAA AGATCAGCAA AGAGCTCGAT
TCTTACGGTG AAACGATTTG GCCTGGAGAA GAGCAACAAA CTTACCAGCG CCTTATGCGT
CAGTGGAAAA AGTACCTGGT CACTATGGAT CAGTACAACG AAGCGATGCT AGCCAACGAC
AAAAGCAAGG CCCACCCTAT TTTGGCGAAC TCTTTACCTG CTTTCGAAGC GGTTGACTCT
GAGCTCGGTG AACTGATCCG TCTACTTAAA AATGCTATGG ACAGTAACAA AACTCATATT
CTTTCTTCTG TAAATGGATT GAGTAACTCG TCAATTGCAA GCAACGTGAT TATTCTGCTT
ATCATGGTAG GCATGACGTA CGTGCTGACA CGCCTTATTT GTGGCCCACT AAAACTTGTT
GTCGAGCAAG CAAATGCCAT CGCAACAGGT GACCTATCAA ACGACATCGA TCGTAAAGCC
ATCGGCAATG ACGAGCTAGG TGAGCTGGCA GATGCGACCA CTAAGATGCA AGATGATTTG
CGCCAAGTTA TCGACAACGT GATTGCTGCG GTCACACAGT TAAGCAGTGC GGTAGAAGAG
ATGAATCAAA TCTCCGACAT TTCTGCATCT GGTATGAAGG ATCAACAACT GCAAATTACA
CACATTGCTA CGGCAATGAC AGAAATGAAA GCAGCAGTAG CCGATGTTGC ACGTAATACT
GAAGATTCAG CGAACCAAGC TAACGAAGCA AACCGTCGTA CACAACACGG TGTTCGTGAA
ACGCAAGGCA TGGTTGATGC GATTCATGAA GTTTCAAACG TAATTGGTGC TGCGGGCGAT
ACTGTGGCAG AGCTTGAACA GCAATCGAAT AAAATTAACG TTATTGTTGA TGTTATCCGT
GACATTGCCG ATCAAACCAA CCTACTTGCG CTTAATGCAG CCATTGAAGC TGCGCGTGCT
GGTGAGTCTG GTCGCGGTTT TGCCGTGGTT GCGGACGAGG TTCGAACGCT TGCAGGCCGT
ACGCAAGATT CAACCAGCGA AATTACGTCG ATCATTGAAC AGCTACAATC GCTTGCAAAA
GACGCGAAAT CTGCGACAGA ACTTTCTAGA ACCAGTATCT CAGAATGTGC AGAGCAAGGC
ATTCAATCAA AACAGCTGAT GAGCGACATT GAACACTCGA TTTCTGATAT CTCAGACATG
GGCACCCAAA TCGCCACGGC TTGTAACCAG CAAGACTCTG TTGCAGAAGA GCTTAACCGC
AGCATTGAAA ACATACACTT GGCATCTCAA GAAGTATCAC AGGGCTCAGA GCAAACCGCA
CAGGCTTGTC GTGAGCTAAG CCAGCTGTCA ATTTCTCTTA AAGATGTAAT GAGCCGCTTT
AAACTGAGTT AA
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| Protein sequence | MSIKNLSIAK KISLSFLLIA IVNIAFGVFL STELKSIKSE LLNYTDDTLP AMERVDSIRD
HLSRWRRAQF ATYTYEDADQ IRNKIASNIR EREKISKELD SYGETIWPGE EQQTYQRLMR
QWKKYLVTMD QYNEAMLAND KSKAHPILAN SLPAFEAVDS ELGELIRLLK NAMDSNKTHI
LSSVNGLSNS SIASNVIILL IMVGMTYVLT RLICGPLKLV VEQANAIATG DLSNDIDRKA
IGNDELGELA DATTKMQDDL RQVIDNVIAA VTQLSSAVEE MNQISDISAS GMKDQQLQIT
HIATAMTEMK AAVADVARNT EDSANQANEA NRRTQHGVRE TQGMVDAIHE VSNVIGAAGD
TVAELEQQSN KINVIVDVIR DIADQTNLLA LNAAIEAARA GESGRGFAVV ADEVRTLAGR
TQDSTSEITS IIEQLQSLAK DAKSATELSR TSISECAEQG IQSKQLMSDI EHSISDISDM
GTQIATACNQ QDSVAEELNR SIENIHLASQ EVSQGSEQTA QACRELSQLS ISLKDVMSRF
KLS
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