More than 300 homologs were found in PanDaTox collection
for query gene PputW619_1643 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  100 
 
 		 219 aa  433  1e-121  Pseudomonas putida W619  Bacteria  normal  0.118638  normal  1 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  87.21 
 
 		 219 aa  381  1e-105  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  87.67 
 
 		 219 aa  377  1e-104  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  88.13 
 
 		 219 aa  380  1e-104  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  78.54 
 
 		 219 aa  333  1e-90  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_3526  DNA-binding response regulator, LuxR family  74.11 
 
 		 220 aa  308  2.9999999999999997e-83  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0134281  n/a   
 
 
-
 
NC_007005  Psyr_3299  LuxR response regulator receiver  71.95 
 
 		 220 aa  306  1.0000000000000001e-82  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0158345  normal  1 
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  62.56 
 
 		 214 aa  266  2e-70  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  47.44 
 
 		 219 aa  190  1e-47  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  45.02 
 
 		 215 aa  179  4e-44  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal  1 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  48.13 
 
 		 226 aa  177  9e-44  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  38.71 
 
 		 220 aa  175  5e-43  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  46.79 
 
 		 217 aa  169  3e-41  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  41.98 
 
 		 211 aa  167  9e-41  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  40.47 
 
 		 221 aa  162  4.0000000000000004e-39  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  40.83 
 
 		 216 aa  160  1e-38  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  39.81 
 
 		 216 aa  160  1e-38  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  37.67 
 
 		 218 aa  160  1e-38  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  41.4 
 
 		 215 aa  160  2e-38  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  41.12 
 
 		 215 aa  157  1e-37  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  39.53 
 
 		 218 aa  157  2e-37  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  36.97 
 
 		 215 aa  156  2e-37  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  36.62 
 
 		 218 aa  157  2e-37  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  39.34 
 
 		 214 aa  154  9e-37  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  37.32 
 
 		 215 aa  153  2e-36  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  37.16 
 
 		 216 aa  152  2.9999999999999998e-36  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  37.33 
 
 		 229 aa  152  5e-36  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  41.23 
 
 		 213 aa  152  5e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  35.65 
 
 		 253 aa  151  7e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  38.68 
 
 		 213 aa  151  8e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  37.33 
 
 		 218 aa  151  8e-36  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  37.33 
 
 		 218 aa  151  8e-36  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  37.33 
 
 		 218 aa  150  1e-35  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  36.41 
 
 		 216 aa  149  2e-35  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  39.27 
 
 		 221 aa  149  2e-35  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  38.14 
 
 		 208 aa  150  2e-35  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  38.1 
 
 		 212 aa  149  4e-35  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  38.65 
 
 		 215 aa  148  5e-35  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  40.38 
 
 		 212 aa  148  5e-35  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  37.73 
 
 		 226 aa  148  6e-35  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  36.87 
 
 		 218 aa  148  6e-35  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  34.22 
 
 		 242 aa  146  3e-34  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  34.56 
 
 		 236 aa  145  6e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  39.35 
 
 		 225 aa  144  8.000000000000001e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_010338  Caul_2685  two component LuxR family transcriptional regulator  36.79 
 
 		 222 aa  144  2e-33  Caulobacter sp. K31  Bacteria  normal  0.120511  normal  1 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  37.09 
 
 		 212 aa  143  2e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1971  two component transcriptional regulator, LuxR family  37.67 
 
 		 216 aa  142  4e-33  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008752  Aave_4229  two component LuxR family transcriptional regulator  42.58 
 
 		 219 aa  142  4e-33  Acidovorax citrulli AAC00-1  Bacteria  normal  0.720334  normal  0.28913 
 
 
-
 
NC_010717  PXO_06170  response regulator  43.54 
 
 		 210 aa  141  6e-33  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.624626  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  33.96 
 
 		 217 aa  141  6e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  39.42 
 
 		 220 aa  141  6e-33  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_010717  PXO_00996  response regulator  43.54 
 
 		 210 aa  141  6e-33  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  35.19 
 
 		 223 aa  141  7e-33  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  40.1 
 
 		 214 aa  140  9.999999999999999e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  35.85 
 
 		 213 aa  140  9.999999999999999e-33  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  39.52 
 
 		 214 aa  140  1.9999999999999998e-32  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  33.03 
 
 		 234 aa  139  1.9999999999999998e-32  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  38.21 
 
 		 215 aa  140  1.9999999999999998e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  35.1 
 
 		 214 aa  139  3.9999999999999997e-32  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  37.98 
 
 		 229 aa  139  3.9999999999999997e-32  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  36.24 
 
 		 214 aa  139  3.9999999999999997e-32  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_008228  Patl_2450  two component LuxR family transcriptional regulator  35.48 
 
 		 214 aa  139  3.9999999999999997e-32  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00539256  n/a   
 
 
-
 
NC_008825  Mpe_A0581  two component LuxR family transcriptional regulator  36.28 
 
 		 210 aa  139  4.999999999999999e-32  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  35.55 
 
 		 223 aa  138  4.999999999999999e-32  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  37.74 
 
 		 215 aa  138  6e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  37.74 
 
 		 215 aa  138  6e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  37.74 
 
 		 215 aa  138  6e-32  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  37.74 
 
 		 215 aa  138  6e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  37.74 
 
 		 215 aa  138  6e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  35.38 
 
 		 233 aa  138  6e-32  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  37.74 
 
 		 215 aa  138  6e-32  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  36.54 
 
 		 206 aa  138  7e-32  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  36.74 
 
 		 214 aa  138  7.999999999999999e-32  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  39.81 
 
 		 214 aa  138  7.999999999999999e-32  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  34.42 
 
 		 210 aa  138  7.999999999999999e-32  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0301144 
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  38.36 
 
 		 244 aa  137  8.999999999999999e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  34.25 
 
 		 234 aa  137  8.999999999999999e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  32.41 
 
 		 213 aa  137  1e-31  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  33.02 
 
 		 264 aa  137  1e-31  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  34.63 
 
 		 219 aa  137  1e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  35.27 
 
 		 238 aa  137  2e-31  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  34.26 
 
 		 215 aa  136  2e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  36.11 
 
 		 216 aa  136  2e-31  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  33.49 
 
 		 217 aa  136  2e-31  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  34.4 
 
 		 215 aa  136  2e-31  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
NC_008543  Bcen2424_3595  two component LuxR family transcriptional regulator  34.26 
 
 		 215 aa  137  2e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  38.28 
 
 		 214 aa  136  2e-31  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  33.49 
 
 		 215 aa  135  3.0000000000000003e-31  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  34.74 
 
 		 210 aa  135  3.0000000000000003e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  35.94 
 
 		 228 aa  136  3.0000000000000003e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  32.09 
 
 		 215 aa  136  3.0000000000000003e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  35.07 
 
 		 213 aa  136  3.0000000000000003e-31  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  35.62 
 
 		 218 aa  136  3.0000000000000003e-31  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  37.5 
 
 		 215 aa  135  4e-31  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  37.02 
 
 		 219 aa  135  4e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_011146  Gbem_2253  two component transcriptional regulator, LuxR family  35.81 
 
 		 216 aa  135  4e-31  Geobacter bemidjiensis Bem  Bacteria  normal  0.174263  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  37.5 
 
 		 215 aa  135  4e-31  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  36.02 
 
 		 213 aa  135  4e-31  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  37.5 
 
 		 215 aa  135  4e-31  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_4067  two component LuxR family transcriptional regulator  37.21 
 
 		 233 aa  135  5e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.836498  normal  0.141664 
 
 
-
 
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