More than 300 homologs were found in PanDaTox collection
for query gene Meso_3425 on replicon NC_008254
Organism: Chelativorans sp. BNC1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008254  Meso_3425  cyclic nucleotide-binding protein  100 
 
 
151 aa  293  4e-79  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1928  cyclic nucleotide-binding protein  59.06 
 
 
153 aa  167  6e-41  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR2005  cyclic nucleotide-binding protein  59.06 
 
 
153 aa  166  8e-41  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0964  cyclic nucleotide-binding protein  55.7 
 
 
152 aa  160  4.0000000000000004e-39  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_3055  cyclic nucleotide-binding protein  44 
 
 
151 aa  127  6e-29  Sinorhizobium medicae WSM419  Bacteria  normal  0.517471  normal 
 
 
-
 
NC_011989  Avi_4229  hypothetical protein  40 
 
 
151 aa  108  3e-23  Agrobacterium vitis S4  Bacteria  unclonable  0.000114025  n/a   
 
 
-
 
NC_011369  Rleg2_3764  cyclic nucleotide-binding protein  39.46 
 
 
151 aa  103  9e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4089  putative transcriptional regulator, Crp/Fnr family  38.36 
 
 
151 aa  101  4e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.998394  normal 
 
 
-
 
NC_009720  Xaut_1772  cyclic nucleotide-binding protein  36.84 
 
 
161 aa  94.7  3e-19  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0691544 
 
 
-
 
NC_011666  Msil_0331  cyclic nucleotide-binding protein  40.98 
 
 
150 aa  86.3  1e-16  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0211845 
 
 
-
 
NC_011757  Mchl_1854  cyclic nucleotide-binding protein  35.1 
 
 
155 aa  82.4  0.000000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.795804 
 
 
-
 
NC_010172  Mext_1575  cyclic nucleotide-binding  34.44 
 
 
155 aa  80.1  0.00000000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.6817  normal  0.0500798 
 
 
-
 
NC_009719  Plav_1291  cyclic nucleotide-binding protein  32.89 
 
 
164 aa  78.6  0.00000000000003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.234039  normal 
 
 
-
 
NC_011004  Rpal_0285  cyclic nucleotide-binding protein  32.21 
 
 
149 aa  78.2  0.00000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.512507  n/a   
 
 
-
 
NC_007778  RPB_0380  cyclic nucleotide-binding domain-containing protein  33.33 
 
 
148 aa  77.8  0.00000000000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4104  cyclic nucleotide-binding protein  34.48 
 
 
163 aa  77.4  0.00000000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.374225 
 
 
-
 
NC_007958  RPD_0441  cyclic nucleotide-binding  32 
 
 
148 aa  77  0.00000000000009  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.309044  normal  0.811617 
 
 
-
 
NC_008554  Sfum_3249  cyclic nucleotide-binding protein  30.87 
 
 
171 aa  77  0.00000000000009  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  33.6 
 
 
225 aa  75.9  0.0000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1016  cyclic nucleotide-binding protein  38.1 
 
 
149 aa  75.1  0.0000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0178  cyclic nucleotide-binding protein  36.15 
 
 
138 aa  74.7  0.0000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.220978  normal 
 
 
-
 
NC_007406  Nwi_0086  cyclic nucleotide-binding protein  31.54 
 
 
160 aa  74.7  0.0000000000004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.929528  normal  0.0740226 
 
 
-
 
NC_010511  M446_1398  cyclic nucleotide-binding protein  37.68 
 
 
168 aa  73.9  0.0000000000007  Methylobacterium sp. 4-46  Bacteria  normal  0.144588  normal  0.108065 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  33.88 
 
 
224 aa  73.2  0.000000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5013  cyclic nucleotide-binding protein  34.06 
 
 
147 aa  73.2  0.000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.32822  normal  0.191008 
 
 
-
 
NC_010725  Mpop_1664  cyclic nucleotide-binding protein  31.58 
 
 
159 aa  72.4  0.000000000002  Methylobacterium populi BJ001  Bacteria  normal  normal  0.617914 
 
 
-
 
NC_012858  Rleg_7131  putative transcriptional regulator, Crp/Fnr family  29.1 
 
 
155 aa  72.4  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.331754 
 
 
-
 
NC_009620  Smed_4601  cyclic nucleotide-binding protein  29.1 
 
 
154 aa  72.4  0.000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.930738 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  34.23 
 
 
228 aa  72  0.000000000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3019  cyclic nucleotide-binding protein  30.28 
 
 
149 aa  71.6  0.000000000003  Methylobacterium populi BJ001  Bacteria  normal  0.852704  normal 
 
 
-
 
NC_010511  M446_2719  cyclic nucleotide-binding protein  31.88 
 
 
151 aa  70.5  0.000000000008  Methylobacterium sp. 4-46  Bacteria  normal  0.460468  normal  0.384505 
 
 
-
 
NC_011894  Mnod_4405  cyclic nucleotide-binding protein  31.39 
 
 
148 aa  69.7  0.00000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0279  cyclic nucleotide-binding domain-containing protein  32.33 
 
 
149 aa  69.7  0.00000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.294504 
 
 
-
 
NC_011988  Avi_5607  cAMP-dependent protein kinase regulatory subunit  27.61 
 
 
154 aa  68.9  0.00000000002  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_0093  cyclic nucleotide-binding domain-containing protein  31.54 
 
 
149 aa  69.3  0.00000000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.132878  n/a   
 
 
-
 
NC_011366  Rleg2_5981  cyclic nucleotide-binding protein  29.1 
 
 
155 aa  68.6  0.00000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3122  cyclic nucleotide-binding protein  30.77 
 
 
149 aa  68.6  0.00000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.196103 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  31.08 
 
 
228 aa  68.2  0.00000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2352  cyclic nucleotide-binding protein  36.72 
 
 
154 aa  67.8  0.00000000005  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.674498  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  34.87 
 
 
226 aa  67.8  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_010172  Mext_2896  cyclic nucleotide-binding  30.77 
 
 
194 aa  67.8  0.00000000005  Methylobacterium extorquens PA1  Bacteria  normal  0.633977  normal 
 
 
-
 
NC_008043  TM1040_3676  cyclic nucleotide-binding protein  33.06 
 
 
1043 aa  67  0.00000000008  Ruegeria sp. TM1040  Bacteria  normal  0.88824  normal 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  34.13 
 
 
226 aa  67  0.00000000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_011891  A2cp1_1612  cyclic nucleotide-binding protein  34.92 
 
 
154 aa  66.6  0.0000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  34.45 
 
 
224 aa  66.6  0.0000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1517  cyclic nucleotide-binding protein  34.92 
 
 
154 aa  66.2  0.0000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.0629843  n/a   
 
 
-
 
NC_009953  Sare_4762  Crp/FNR family transcriptional regulator  35.83 
 
 
225 aa  64.7  0.0000000004  Salinispora arenicola CNS-205  Bacteria  normal  0.900483  hitchhiker  0.0000929699 
 
 
-
 
NC_009380  Strop_4322  cyclic nucleotide-binding  35.83 
 
 
225 aa  64.7  0.0000000004  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0230513 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  33.96 
 
 
242 aa  64.3  0.0000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_011989  Avi_3942  cAMP-dependent protein kinase regulatory subunit  27.89 
 
 
154 aa  64.7  0.0000000005  Agrobacterium vitis S4  Bacteria  normal  0.644852  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  33.33 
 
 
228 aa  63.2  0.000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  32.5 
 
 
224 aa  63.5  0.000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  30 
 
 
224 aa  62.8  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1472  CAAX amino terminal protease family  30 
 
 
381 aa  62.8  0.000000002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.407531  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  32.17 
 
 
226 aa  62.8  0.000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_009675  Anae109_1521  cyclic nucleotide-binding protein  34.13 
 
 
153 aa  62  0.000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.000183504  normal 
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  28.57 
 
 
224 aa  61.6  0.000000004  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  28.57 
 
 
224 aa  61.2  0.000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  29.17 
 
 
224 aa  60.8  0.000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  27.73 
 
 
224 aa  60.8  0.000000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  28.33 
 
 
224 aa  60.5  0.000000008  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  35.63 
 
 
225 aa  60.1  0.000000009  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  28.33 
 
 
224 aa  60.1  0.00000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  28.33 
 
 
224 aa  60.1  0.00000001  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  28.33 
 
 
224 aa  60.1  0.00000001  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  29.01 
 
 
231 aa  59.7  0.00000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  32.56 
 
 
225 aa  58.9  0.00000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3652  putative transcriptional regulator, Crp/Fnr family  30.47 
 
 
153 aa  58.5  0.00000003  Stackebrandtia nassauensis DSM 44728  Bacteria  decreased coverage  0.0096364  normal 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  31.78 
 
 
225 aa  58.9  0.00000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  29.17 
 
 
220 aa  58.5  0.00000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_008554  Sfum_4027  cyclic nucleotide-binding protein  27.78 
 
 
413 aa  58.5  0.00000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1494  cyclic nucleotide-binding protein  32.48 
 
 
119 aa  57.8  0.00000005  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.00548568  normal 
 
 
-
 
NC_009720  Xaut_1892  cyclic nucleotide-binding protein  25 
 
 
147 aa  57.4  0.00000007  Xanthobacter autotrophicus Py2  Bacteria  normal  0.326195  normal 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  32 
 
 
224 aa  57.4  0.00000007  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4167  cyclic nucleotide-binding protein  30.08 
 
 
570 aa  57  0.00000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1532  cyclic nucleotide-binding domain-containing protein  30.08 
 
 
141 aa  56.6  0.0000001  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.31549 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  31.87 
 
 
249 aa  56.6  0.0000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_008554  Sfum_4030  cyclic nucleotide-binding protein  25.38 
 
 
173 aa  56.6  0.0000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.900362 
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  27.54 
 
 
225 aa  55.8  0.0000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_007498  Pcar_0452  cAMP-binding protein  30.23 
 
 
160 aa  55.5  0.0000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000000045265  n/a   
 
 
-
 
NC_013235  Namu_3582  cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  37.23 
 
 
554 aa  55.8  0.0000002  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.0031716  normal  0.0272444 
 
 
-
 
NC_013947  Snas_3434  putative transcriptional regulator, Crp/Fnr family  29.6 
 
 
160 aa  55.1  0.0000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.748195  normal 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  25.68 
 
 
234 aa  55.1  0.0000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_008148  Rxyl_2796  Crp/FNR family transcriptional regulator  29.68 
 
 
250 aa  55.1  0.0000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  25.85 
 
 
237 aa  54.3  0.0000005  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  26.5 
 
 
234 aa  54.3  0.0000006  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_2490  cyclic nucleotide-binding protein  29.66 
 
 
143 aa  54.3  0.0000006  Mycobacterium sp. MCS  Bacteria  normal  0.529165  n/a   
 
 
-
 
NC_008705  Mkms_2535  cyclic nucleotide-binding protein  29.66 
 
 
143 aa  54.3  0.0000006  Mycobacterium sp. KMS  Bacteria  normal  0.187626  normal  0.577012 
 
 
-
 
NC_009077  Mjls_2527  cyclic nucleotide-binding protein  29.66 
 
 
143 aa  54.3  0.0000006  Mycobacterium sp. JLS  Bacteria  normal  normal  0.122265 
 
 
-
 
BN001303  ANIA_04987  cAMP-dependent protein kinase regulatory subunit (PKA regulatory subunit) [Source:UniProtKB/Swiss-Prot;Acc:O59922]  33.72 
 
 
412 aa  53.9  0.0000007  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.599779  normal  0.51731 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  29.75 
 
 
225 aa  53.9  0.0000007  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  31.85 
 
 
227 aa  53.9  0.0000007  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  29.84 
 
 
225 aa  53.9  0.0000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0718  cyclic nucleotide-binding  28.68 
 
 
747 aa  53.9  0.0000008  Polaromonas sp. JS666  Bacteria  hitchhiker  0.00567448  normal 
 
 
-
 
NC_009338  Mflv_4388  CRP/FNR family transcriptional regulator  28.33 
 
 
225 aa  53.9  0.0000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0432  cyclic nucleotide-binding protein  31.25 
 
 
860 aa  53.5  0.0000009  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3539  cyclic nucleotide-binding protein  30.08 
 
 
857 aa  53.5  0.000001  Geobacter lovleyi SZ  Bacteria  normal  0.0290793  n/a   
 
 
-
 
NC_007947  Mfla_1926  cyclic nucleotide-binding domain-containing protein  27.07 
 
 
168 aa  53.1  0.000001  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2678  cyclic nucleotide-binding protein  28.99 
 
 
1017 aa  52.8  0.000001  Ruegeria sp. TM1040  Bacteria  normal  0.0916435  normal 
 
 
-
 
NC_008148  Rxyl_1332  Crp/FNR family transcriptional regulator  29.27 
 
 
238 aa  53.5  0.000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.407818  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>