Gene Snas_3652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3652 
Symbol 
ID8884851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3884498 
End bp3884959 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003512403 
Protein GI291301125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0096364 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATT CGGACGTATT GCGGGACTTC GAGTTCTTCG CGGGCCTGTC GACCGAACAG 
CTGGCCCTTG TCGGGATCAC CGGCCGCAGG GTCCGCTACT CGGCGGGCCA GCGGTTGTTC
GCCGAAGGAT CCCCGGCTTC GGGCTTTTGG CTGTTGGAGA GCGGTTCGGT CGACATCGAC
ACTCCGGTCG TCGGCGGCGG GCGGGCGGTC CTGGACACCC TGGGGCCGGG CGACGTCGTC
GGCTGGTCCT GGTTGATACC ACCCCACCTG TGGCACTTCG GTGCCGTGGC CACCACCGAC
ATCACCGCGA TCCTGCTGGA CACCGAACGG TTGGCCCGGG TGATGCGCAA CGAACCCGAT
CTGGGTTTCG CGCTGTCGAC TCGGCTGTGC GGCGTCCTGG CGCACCGGCT GCATGCCACC
CGGTACCGCG ACCTGCACCA TCGCACCGAG GCCCGGTCAT GA
 
Protein sequence
MTHSDVLRDF EFFAGLSTEQ LALVGITGRR VRYSAGQRLF AEGSPASGFW LLESGSVDID 
TPVVGGGRAV LDTLGPGDVV GWSWLIPPHL WHFGAVATTD ITAILLDTER LARVMRNEPD
LGFALSTRLC GVLAHRLHAT RYRDLHHRTE ARS