Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3652 |
Symbol | |
ID | 8884851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3884498 |
End bp | 3884959 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003512403 |
Protein GI | 291301125 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0096364 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCATT CGGACGTATT GCGGGACTTC GAGTTCTTCG CGGGCCTGTC GACCGAACAG CTGGCCCTTG TCGGGATCAC CGGCCGCAGG GTCCGCTACT CGGCGGGCCA GCGGTTGTTC GCCGAAGGAT CCCCGGCTTC GGGCTTTTGG CTGTTGGAGA GCGGTTCGGT CGACATCGAC ACTCCGGTCG TCGGCGGCGG GCGGGCGGTC CTGGACACCC TGGGGCCGGG CGACGTCGTC GGCTGGTCCT GGTTGATACC ACCCCACCTG TGGCACTTCG GTGCCGTGGC CACCACCGAC ATCACCGCGA TCCTGCTGGA CACCGAACGG TTGGCCCGGG TGATGCGCAA CGAACCCGAT CTGGGTTTCG CGCTGTCGAC TCGGCTGTGC GGCGTCCTGG CGCACCGGCT GCATGCCACC CGGTACCGCG ACCTGCACCA TCGCACCGAG GCCCGGTCAT GA
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Protein sequence | MTHSDVLRDF EFFAGLSTEQ LALVGITGRR VRYSAGQRLF AEGSPASGFW LLESGSVDID TPVVGGGRAV LDTLGPGDVV GWSWLIPPHL WHFGAVATTD ITAILLDTER LARVMRNEPD LGFALSTRLC GVLAHRLHAT RYRDLHHRTE ARS
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