Gene RPD_0441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0441 
Symbol 
ID4020907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp508696 
End bp509142 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content68% 
IMG OID637960626 
Productcyclic nucleotide-binding 
Protein accessionYP_567580 
Protein GI91974921 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.309044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.811617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCG AAGATGATGT TGCCCTGCTC GAGCGCGTCC CGACGCTGCG GCTGTTGGGC 
GACACCTCGT TGCGGATGCT GGCGATCGGC TCCGATCAGC GCGAGTTCGC CCGCGGCGAC
GTGCTGTTCT CCGCCGGCGA CGCCTCCGAC GCCGGCTATG TGGTGCAGAC CGGATCGTTC
CAGGTGACAT CGGCCGACGG CGGTCCGCAC GAAATGATCG CGCGGCCGGG CGATCTGATC
GGCGAACTGG CGCTGGTGCT GCCGATGCCG CGGCCGTCGA GCGCGGTGGC GATGGAGTAC
TCGTCGGTGG TCCGGATCGC GCGCAGCCTG TTTCAGCGCG TGCTCGAAAG CGACCCCGTG
GCCGCCCGTA ACCTCCGCGA CGAATTCGCC GCCCGCACCA CCATGATCGC CAAAGACATC
ACCAGAGCCG GCGCGAAGCT CACGTAG
 
Protein sequence
MSIEDDVALL ERVPTLRLLG DTSLRMLAIG SDQREFARGD VLFSAGDASD AGYVVQTGSF 
QVTSADGGPH EMIARPGDLI GELALVLPMP RPSSAVAMEY SSVVRIARSL FQRVLESDPV
AARNLRDEFA ARTTMIAKDI TRAGAKLT