More than 300 homologs were found in PanDaTox collection
for query gene Gobs_2015 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  100 
 
 
232 aa  449  1e-125  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  69 
 
 
223 aa  299  3e-80  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  3.86408e-05  hitchhiker  0.000570848 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  66.67 
 
 
223 aa  286  1e-76  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  63.16 
 
 
226 aa  273  1e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  63.64 
 
 
224 aa  268  6e-71  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  64.07 
 
 
225 aa  266  3e-70  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  64.16 
 
 
224 aa  262  3e-69  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  65.16 
 
 
236 aa  259  3e-68  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  61.95 
 
 
226 aa  258  7e-68  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  60 
 
 
226 aa  256  2e-67  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  61.61 
 
 
230 aa  254  6e-67  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  61.47 
 
 
226 aa  253  1e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  59.11 
 
 
222 aa  251  9e-66  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  61.33 
 
 
221 aa  249  4e-65  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  61.33 
 
 
222 aa  248  5e-65  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  63.51 
 
 
222 aa  248  5e-65  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  60.89 
 
 
221 aa  246  2e-64  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  58.67 
 
 
217 aa  241  8e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  7.94288e-08  unclonable  3.32591e-08 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  56.89 
 
 
215 aa  240  1e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  62.22 
 
 
224 aa  239  4e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  56 
 
 
225 aa  238  5e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  57.33 
 
 
221 aa  238  7e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  53.74 
 
 
233 aa  236  3e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  57.47 
 
 
221 aa  233  2e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  57.27 
 
 
222 aa  233  2e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  57.39 
 
 
226 aa  231  8e-60  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  56.25 
 
 
228 aa  230  1e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  56.52 
 
 
226 aa  229  2e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  57.33 
 
 
244 aa  229  2e-59  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  57.21 
 
 
223 aa  230  2e-59  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  57.85 
 
 
220 aa  229  2e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  57.02 
 
 
217 aa  228  5e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  56.31 
 
 
219 aa  228  7e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  55.86 
 
 
220 aa  228  9e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  55.86 
 
 
218 aa  226  2e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  56.56 
 
 
214 aa  226  3e-58  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  56.31 
 
 
224 aa  224  8e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  55.84 
 
 
247 aa  224  9e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  53.1 
 
 
218 aa  224  1e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  55.41 
 
 
227 aa  221  9e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  52.86 
 
 
221 aa  220  1e-56  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  55.31 
 
 
241 aa  220  1e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  55.36 
 
 
225 aa  219  3e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.65 
 
 
261 aa  218  6e-56  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  56.19 
 
 
214 aa  217  1e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  57.78 
 
 
220 aa  216  3e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  52.65 
 
 
225 aa  215  4e-55  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  54.15 
 
 
227 aa  215  5e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  53.22 
 
 
226 aa  214  7e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  56 
 
 
228 aa  214  7e-55  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53.6 
 
 
234 aa  214  8e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  53.98 
 
 
215 aa  213  2e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  52.42 
 
 
234 aa  213  2e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  51.34 
 
 
223 aa  213  3e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.31 
 
 
225 aa  213  3e-54  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  55.61 
 
 
214 aa  213  3e-54  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  52.86 
 
 
218 aa  211  8e-54  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  53.54 
 
 
225 aa  211  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  55.07 
 
 
220 aa  209  2e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  50.67 
 
 
221 aa  210  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  47.15 
 
 
248 aa  209  4e-53  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  51.57 
 
 
224 aa  209  4e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  52.54 
 
 
231 aa  208  5e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  55.2 
 
 
215 aa  208  5e-53  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  52.65 
 
 
220 aa  208  6e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  51.3 
 
 
224 aa  207  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  55.56 
 
 
302 aa  207  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.1 
 
 
230 aa  207  1e-52  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.1 
 
 
229 aa  205  5e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  55.2 
 
 
221 aa  204  7e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.91 
 
 
226 aa  204  7e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  53.22 
 
 
229 aa  204  9e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  51.33 
 
 
220 aa  204  9e-52  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  53.54 
 
 
230 aa  203  1e-51  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  51.33 
 
 
227 aa  203  1e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  51.8 
 
 
219 aa  204  1e-51  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  51.06 
 
 
242 aa  204  1e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  1.13212e-10 
 
 
-
 
NC_013521  Sked_37860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.55 
 
 
221 aa  202  3e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  52.65 
 
 
225 aa  202  4e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  48.12 
 
 
250 aa  202  4e-51  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  52.65 
 
 
241 aa  201  7e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  48.05 
 
 
258 aa  201  8e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  52.21 
 
 
224 aa  201  8e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50.45 
 
 
228 aa  201  9e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  51.77 
 
 
225 aa  201  9e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  52.44 
 
 
223 aa  201  1e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.29 
 
 
236 aa  201  1e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  54.39 
 
 
221 aa  200  1e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  50.22 
 
 
225 aa  201  1e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  40.87 
 
 
261 aa  200  1e-50  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  49.56 
 
 
225 aa  200  2e-50  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  51.32 
 
 
218 aa  200  2e-50  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50 
 
 
239 aa  200  2e-50  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  49.34 
 
 
231 aa  199  4e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  50.21 
 
 
234 aa  198  8e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  52.89 
 
 
225 aa  197  8e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  51.3 
 
 
234 aa  197  9e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  52.89 
 
 
230 aa  197  1e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  50.22 
 
 
225 aa  197  1e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  50.45 
 
 
219 aa  197  1e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
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