More than 300 homologs were found in PanDaTox collection
for query gene Cagg_0013 on replicon NC_011831
Organism: Chloroflexus aggregans DSM 9485



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011831  Cagg_0013  response regulator receiver modulated diguanylate cyclase  100 
 
 
314 aa  643  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.992585 
 
 
-
 
NC_009523  RoseRS_4451  response regulator receiver modulated diguanylate cyclase  70.7 
 
 
314 aa  467  1e-130  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.586345 
 
 
-
 
NC_009767  Rcas_0804  response regulator receiver modulated diguanylate cyclase  68.79 
 
 
314 aa  457  1e-127  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.504991 
 
 
-
 
NC_009972  Haur_4115  response regulator receiver protein  67.41 
 
 
311 aa  426  1e-118  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3221  response regulator receiver modulated diguanylate cyclase  34.69 
 
 
443 aa  184  1e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0497788 
 
 
-
 
NC_009523  RoseRS_3924  response regulator receiver modulated diguanylate cyclase  34.01 
 
 
443 aa  180  3e-44  Roseiflexus sp. RS-1  Bacteria  normal  0.350169  normal 
 
 
-
 
NC_010320  Teth514_2061  response regulator receiver modulated diguanylate cyclase  31.96 
 
 
318 aa  170  3e-41  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  3.65539e-08  n/a   
 
 
-
 
NC_009012  Cthe_1805  response regulator receiver modulated diguanylate cyclase  31.99 
 
 
310 aa  161  1e-38  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0638722  n/a   
 
 
-
 
NC_008578  Acel_1275  response regulator receiver modulated diguanylate cyclase  30.38 
 
 
304 aa  155  1e-36  Acidothermus cellulolyticus 11B  Bacteria  hitchhiker  0.00827298  normal  0.435617 
 
 
-
 
NC_009953  Sare_1866  response regulator receiver modulated diguanylate cyclase  32.96 
 
 
326 aa  150  3e-35  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1873  response regulator receiver  32.96 
 
 
326 aa  150  4e-35  Salinispora tropica CNB-440  Bacteria  normal  normal  0.402703 
 
 
-
 
NC_009675  Anae109_1854  histidine kinase  31.86 
 
 
1111 aa  148  1e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.131557  normal 
 
 
-
 
NC_013440  Hoch_3814  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  28.96 
 
 
1131 aa  147  2e-34  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.257486 
 
 
-
 
NC_011831  Cagg_0424  response regulator receiver modulated diguanylate cyclase  31.42 
 
 
441 aa  147  3e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.130175  normal 
 
 
-
 
NC_009972  Haur_3468  response regulator receiver modulated diguanylate cyclase  32.38 
 
 
412 aa  146  4e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_0087  response regulator receiver modulated diguanylate cyclase  30.61 
 
 
308 aa  145  1e-33  Elusimicrobium minutum Pei191  Bacteria  normal  normal  0.010948 
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  28.52 
 
 
322 aa  140  2e-32  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_013947  Snas_2593  response regulator receiver modulated diguanylate cyclase  32.05 
 
 
340 aa  140  2e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.483  normal  0.196753 
 
 
-
 
NC_009972  Haur_4308  response regulator receiver modulated diguanylate cyclase  27.4 
 
 
552 aa  132  1e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0789  response regulator receiver protein  27.24 
 
 
278 aa  125  9e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_0599  response regulator receiver modulated diguanylate cyclase  27.4 
 
 
313 aa  123  4e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.464892  normal  0.548622 
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  34.94 
 
 
308 aa  119  8e-26  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  30.6 
 
 
310 aa  116  6e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  50.88 
 
 
229 aa  114  2e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_013173  Dbac_0477  response regulator receiver modulated diguanylate cyclase  27.02 
 
 
312 aa  113  4e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.520966  n/a   
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  48.8 
 
 
230 aa  113  4e-24  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_007519  Dde_1584  response regulator receiver modulated diguanylate cyclase  27.27 
 
 
319 aa  111  2e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.335279  n/a   
 
 
-
 
NC_011884  Cyan7425_5215  two component transcriptional regulator, LuxR family  40 
 
 
217 aa  109  8e-23  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  42.4 
 
 
231 aa  107  2e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  43.9 
 
 
229 aa  106  5e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  29.69 
 
 
308 aa  104  2e-21  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  41.3 
 
 
395 aa  103  3e-21  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_1580  two component transcriptional regulator, LuxR family  41.46 
 
 
216 aa  103  3e-21  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  41.3 
 
 
395 aa  103  3e-21  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal 
 
 
-
 
NC_013161  Cyan8802_1605  two component transcriptional regulator, LuxR family  41.46 
 
 
216 aa  103  3e-21  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  45.3 
 
 
225 aa  103  5e-21  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  45.61 
 
 
227 aa  102  7e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  28.85 
 
 
353 aa  102  7e-21  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  32.14 
 
 
374 aa  102  8e-21  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  32.14 
 
 
374 aa  102  8e-21  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  40.62 
 
 
230 aa  102  1e-20  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  33.51 
 
 
230 aa  101  1e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  40.62 
 
 
230 aa  102  1e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2219  response regulator  40.16 
 
 
123 aa  100  2e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  41.67 
 
 
384 aa  100  3e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_013501  Rmar_1501  response regulator receiver protein  42.86 
 
 
132 aa  99.8  6e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  0.153095  n/a   
 
 
-
 
NC_010524  Lcho_3544  response regulator receiver modulated diguanylate cyclase  31.19 
 
 
322 aa  99.4  6e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0106122 
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  44.74 
 
 
230 aa  99.4  6e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  28.39 
 
 
319 aa  99  9e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  42.03 
 
 
235 aa  98.6  1e-19  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.203788 
 
 
-
 
NC_007964  Nham_0640  two component transcriptional regulator  45.45 
 
 
233 aa  99  1e-19  Nitrobacter hamburgensis X14  Bacteria  normal  0.772339  n/a   
 
 
-
 
NC_008577  Shewana3_4015  response regulator receiver modulated diguanylate cyclase  30.91 
 
 
315 aa  98.2  1e-19  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  41.98 
 
 
234 aa  98.6  1e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_007413  Ava_3628  two component LuxR family transcriptional regulator  39.52 
 
 
225 aa  98.6  1e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  0.717242  normal  0.142765 
 
 
-
 
NC_011884  Cyan7425_0981  two component transcriptional regulator, LuxR family  39.83 
 
 
221 aa  98.6  1e-19  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_010571  Oter_3794  response regulator receiver sensor signal transduction histidine kinase  39.66 
 
 
376 aa  99  1e-19  Opitutus terrae PB90-1  Bacteria  normal  0.0277983  normal  0.543799 
 
 
-
 
NC_014248  Aazo_5066  response regulator receiver modulated diguanylate cyclase  25.21 
 
 
338 aa  97.4  2e-19  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2887  LuxR family two component transcriptional regulator  39.52 
 
 
225 aa  98.2  2e-19  'Nostoc azollae' 0708  Bacteria  normal  0.526109  n/a   
 
 
-
 
NC_011729  PCC7424_2955  two component transcriptional regulator, LuxR family  39.55 
 
 
231 aa  97.1  3e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.800941 
 
 
-
 
NC_013174  Jden_2051  two component transcriptional regulator, winged helix family  41.23 
 
 
236 aa  96.7  4e-19  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  43.65 
 
 
239 aa  97.1  4e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  1.11905e-08  n/a   
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  37.88 
 
 
226 aa  97.1  4e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  35.76 
 
 
225 aa  96.7  4e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  39.85 
 
 
231 aa  97.1  4e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.777838 
 
 
-
 
NC_011728  BbuZS7_0421  response regulatory protein  30.28 
 
 
305 aa  96.7  5e-19  Borrelia burgdorferi ZS7  Bacteria  normal  0.972098  n/a   
 
 
-
 
NC_012803  Mlut_04130  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  44.55 
 
 
236 aa  96.3  6e-19  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118973  n/a   
 
 
-
 
NC_013169  Ksed_21620  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  40.8 
 
 
238 aa  96.3  6e-19  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.019443  normal  0.0473518 
 
 
-
 
NC_011831  Cagg_0393  two component transcriptional regulator, winged helix family  43.59 
 
 
227 aa  95.9  8e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.202895 
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  38.69 
 
 
236 aa  95.9  8e-19  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal 
 
 
-
 
NC_011729  PCC7424_2881  two component transcriptional regulator, LuxR family  41.07 
 
 
212 aa  95.5  9e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007406  Nwi_0511  phosphate regulon transcriptional regulatory protein phoB  44.63 
 
 
234 aa  95.1  1e-18  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.473137 
 
 
-
 
NC_011146  Gbem_0743  response regulator receiver protein  42.06 
 
 
132 aa  95.5  1e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2062  GGDEF domain-containing protein  23.62 
 
 
306 aa  95.1  1e-18  Geobacter sulfurreducens PCA  Bacteria  normal  0.0349551  n/a   
 
 
-
 
NC_013521  Sked_31480  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.39 
 
 
239 aa  95.1  1e-18  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00376265  normal  0.556858 
 
 
-
 
NC_008312  Tery_4323  two component LuxR family transcriptional regulator  37.01 
 
 
215 aa  95.1  1e-18  Trichodesmium erythraeum IMS101  Bacteria  normal  0.115662  normal  0.727411 
 
 
-
 
NC_013440  Hoch_0280  response regulator receiver protein  26.81 
 
 
295 aa  94.7  2e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.932912 
 
 
-
 
NC_007925  RPC_4918  two component transcriptional regulator  44.63 
 
 
234 aa  94.7  2e-18  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.134814 
 
 
-
 
NC_007498  Pcar_0653  two-component response regulator PhoB  44.04 
 
 
230 aa  94.7  2e-18  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.131558  n/a   
 
 
-
 
NC_007404  Tbd_0216  two component transcriptional regulator  44.72 
 
 
230 aa  94.4  2e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.305183 
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  44.74 
 
 
227 aa  94.4  2e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal 
 
 
-
 
NC_013522  Taci_0090  two component transcriptional regulator, winged helix family  41.46 
 
 
228 aa  94.4  2e-18  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5261  two component transcriptional regulator, winged helix family  44.63 
 
 
237 aa  94.7  2e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.909356  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  38.66 
 
 
239 aa  94  3e-18  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  38.66 
 
 
239 aa  94  3e-18  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  6.52217e-07  n/a   
 
 
-
 
NC_007643  Rru_A0603  two component transcriptional regulator  39.52 
 
 
233 aa  94  3e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0519325  n/a   
 
 
-
 
NC_014151  Cfla_0717  two component transcriptional regulator, winged helix family  44.55 
 
 
242 aa  94  3e-18  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  3.87016e-06 
 
 
-
 
NC_009767  Rcas_2487  two component transcriptional regulator  37.58 
 
 
224 aa  93.6  3e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.431556  normal 
 
 
-
 
NC_007413  Ava_0124  response regulator receiver Signal transduction histidine kinase  42.5 
 
 
470 aa  93.6  4e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  39.1 
 
 
226 aa  93.6  4e-18  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_013161  Cyan8802_1380  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  39.69 
 
 
715 aa  93.6  4e-18  Cyanothece sp. PCC 8802  Bacteria  normal  0.923401  normal 
 
 
-
 
NC_009997  Sbal195_4336  response regulator receiver modulated diguanylate cyclase  31.08 
 
 
310 aa  93.6  4e-18  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2947  multi-sensor signal transduction histidine kinase  40.16 
 
 
503 aa  93.6  4e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_4132  response regulator receiver modulated diguanylate cyclase  31.08 
 
 
310 aa  93.2  5e-18  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2356  DNA-binding response regulator  38.41 
 
 
232 aa  93.2  5e-18  Clostridium perfringens ATCC 13124  Bacteria  normal  0.020915  n/a   
 
 
-
 
NC_013172  Bfae_07910  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  44.55 
 
 
239 aa  93.2  5e-18  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_4204  response regulator receiver modulated diguanylate cyclase  31.17 
 
 
310 aa  93.2  6e-18  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1991  two component transcriptional regulator  43.8 
 
 
235 aa  92.8  6e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_2353  two component transcriptional regulator, winged helix family  38.73 
 
 
243 aa  92.8  6e-18  Cyanothece sp. PCC 8802  Bacteria  normal  0.0794558  normal 
 
 
-
 
NC_007517  Gmet_1989  diguanylate cyclase  29.63 
 
 
442 aa  92.8  6e-18  Geobacter metallireducens GS-15  Bacteria  decreased coverage  3.57818e-05  normal 
 
 
-
 
NC_008541  Arth_0784  two component transcriptional regulator  43.64 
 
 
239 aa  92.8  6e-18  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>