Gene Sked_31480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31480 
Symbol 
ID8634781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3502280 
End bp3502999 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content69% 
IMG OID 
Productresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain 
Protein accessionYP_003315879 
Protein GI269796424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00376265 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.556858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC CCGAGGCACG TCTCGTCGTG GTCGACGACG AGCCGAACAT CCGTGAGCTG 
CTCGCGACCT CGTTGCGCTT CGCCGGCTTC GAGGTCTTCG CCGCCGAGGA CGGCATGAGC
GCGCTCAAGC TCGTCCGCGA CACCGAGCCC GACCTCGTCG TGCTCGACGT GATGCTGCCC
GACATGGACG GCTTCACCGT GACCCGTCGC ATGCGCGAGA AGGGCCAGCA CATGCCCGTG
CTGTTCCTCA CCGCGCGCGA CGACACGCAG GACAAGATCA CCGGGCTGAC CGTGGGCGGC
GACGACTACG TCACCAAGCC GTTCAGCCTC GAAGAGGTGG TCGCGCGGAT CCGCGCCGTG
CTGCGCCGCA CCCACCCGAC CCCGGTCGAC GACGCGGTGC TGCGCTTCGC GGACCTCGAG
CTCGACGACG ACTCGCACGA GGTCCGCCGT GCGGGACGGG TCGTCGACCT GTCCCCCACC
GAGTTCAAGC TGCTGCGCTA CCTCATGCTC AACCCGGGCC GGGTGCTGTC GAAGGCGCAG
ATCCTCGACC ACGTGTGGCA GTACGACTGG GGCGGCGACG CGAACATCGT CGAGTCCTAC
ATCTCCTACC TGCGACGCAA GATCGACAAC GCGCCGCTCC CGGACGGCTC GACCCCCGAG
CCGCTCATCG CGACCAAGCG AGGCGTCGGC TACCTGCTCC GCCAGCCGCC CAAGAGGTAG
 
Protein sequence
MTEPEARLVV VDDEPNIREL LATSLRFAGF EVFAAEDGMS ALKLVRDTEP DLVVLDVMLP 
DMDGFTVTRR MREKGQHMPV LFLTARDDTQ DKITGLTVGG DDYVTKPFSL EEVVARIRAV
LRRTHPTPVD DAVLRFADLE LDDDSHEVRR AGRVVDLSPT EFKLLRYLML NPGRVLSKAQ
ILDHVWQYDW GGDANIVESY ISYLRRKIDN APLPDGSTPE PLIATKRGVG YLLRQPPKR