| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2356 |
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| Symbol | virI |
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| ID | 4202884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2621984 |
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| End bp | 2622682 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638083221 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_696779 |
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| Protein GI | 110800300 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.020915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGAAA AGATTTTAAT AATTGAGGAT GAACCAGATA TACAAAATAT TTTAAGATAC
TCATTTATGA AAGAGGGATT TAAAGTTAGA TGTGTTGATA AAGGAAGACA GGGTATAGAT
ATATTTAAAG AGTTTAATCC TAGTTTAGTG ATTTTAGATT TGATGTTACC TGATATTAGT
GGATTTGATG TTTGTAGAGA GTTAAATAAA TTAAATGCAA ATATTATAAT GCTTACAGCT
AGAGATGATA TTGTGGACAA GGTTCTAGGA CTAGAGTTAG GAGCAGATGA TTATATAACT
AAACCTTTTG ATATAAGAGA ATGTGTAGCA AGAGTAAAGG TTGCATTAAG AAGAAAAGAT
AAATTTTTAA AGGAAAGCAA TAAAAGTACA GTTAAAGATG AATTCATAAT TGGCTCTATT
AAAATAAAAA GGCAGTCAAG AAAGGTTTAT TTAAATGAAG AAGAGATAAG ATTGAAGCCA
AAAGAAATAG AACTATTACT ATATTTTTTA GATAATCCTA ATATAGCCTT ATCTAGAGAT
CAGATATTAG ATGGGGTATG GGGAGATGAG TATTTTGGAG ATTTTAGAAC TGTTGATGTT
CATGTAAGAA GATTAAGACA AAAGCTTAAT AATGAGGAAA TAATAGAAAC TATTTTTGGA
TTAGGATATA TGTTTAAAGG TGAAAAATAT GAAAGTTAA
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| Protein sequence | MEEKILIIED EPDIQNILRY SFMKEGFKVR CVDKGRQGID IFKEFNPSLV ILDLMLPDIS
GFDVCRELNK LNANIIMLTA RDDIVDKVLG LELGADDYIT KPFDIRECVA RVKVALRRKD
KFLKESNKST VKDEFIIGSI KIKRQSRKVY LNEEEIRLKP KEIELLLYFL DNPNIALSRD
QILDGVWGDE YFGDFRTVDV HVRRLRQKLN NEEIIETIFG LGYMFKGEKY ES
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